Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDX1P52945 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDX1P52945 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDX1P52945 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDX1P52945 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDX1P52945 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDX1P52945 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDX1P52945 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDX1P52945 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDX1P52945 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PDX1P52945 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PDX1P52945 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.23■□□□□ 0.51
PDX1P52945 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDX1P52945 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDX1P52945 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PDX1P52945 TPM4P1-201ENST00000436100 807 ntBASIC18.23■□□□□ 0.51
PDX1P52945 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.23■□□□□ 0.51
PDX1P52945 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PDX1P52945 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.23■□□□□ 0.51
PDX1P52945 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.23■□□□□ 0.51
PDX1P52945 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.23■□□□□ 0.51
PDX1P52945 AC012313.10-201ENST00000623509 926 ntBASIC18.23■□□□□ 0.51
PDX1P52945 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDX1P52945 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDX1P52945 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDX1P52945 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDX1P52945 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDX1P52945 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDX1P52945 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDX1P52945 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
PDX1P52945 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
PDX1P52945 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDX1P52945 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.23■□□□□ 0.51
PDX1P52945 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.23■□□□□ 0.51
PDX1P52945 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PDX1P52945 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.22■□□□□ 0.51
PDX1P52945 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDX1P52945 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.22■□□□□ 0.51
PDX1P52945 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.22■□□□□ 0.51
PDX1P52945 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.22■□□□□ 0.51
PDX1P52945 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDX1P52945 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDX1P52945 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDX1P52945 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.22■□□□□ 0.51
PDX1P52945 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDX1P52945 ATP5G2P1-201ENST00000433580 426 ntBASIC18.22■□□□□ 0.51
PDX1P52945 TSPY23P-201ENST00000440136 739 ntBASIC18.22■□□□□ 0.51
PDX1P52945 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDX1P52945 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDX1P52945 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.22■□□□□ 0.51
PDX1P52945 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDX1P52945 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.22■□□□□ 0.51
PDX1P52945 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDX1P52945 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.22■□□□□ 0.51
PDX1P52945 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.22■□□□□ 0.51
PDX1P52945 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDX1P52945 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDX1P52945 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.22■□□□□ 0.51
PDX1P52945 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.22■□□□□ 0.51
PDX1P52945 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PDX1P52945 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.22■□□□□ 0.51
PDX1P52945 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDX1P52945 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PDX1P52945 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.22■□□□□ 0.51
PDX1P52945 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
PDX1P52945 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDX1P52945 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.21■□□□□ 0.51
PDX1P52945 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.21■□□□□ 0.51
PDX1P52945 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PDX1P52945 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
PDX1P52945 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.21■□□□□ 0.51
PDX1P52945 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PDX1P52945 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.21■□□□□ 0.51
PDX1P52945 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.21■□□□□ 0.51
PDX1P52945 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.21■□□□□ 0.51
PDX1P52945 AC005332.7-201ENST00000614046 2005 ntBASIC18.21■□□□□ 0.51
PDX1P52945 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDX1P52945 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDX1P52945 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
PDX1P52945 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.5
PDX1P52945 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDX1P52945 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PDX1P52945 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PDX1P52945 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDX1P52945 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDX1P52945 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDX1P52945 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PDX1P52945 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDX1P52945 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.2■□□□□ 0.5
PDX1P52945 HBZP1-201ENST00000354915 429 ntBASIC18.2■□□□□ 0.5
PDX1P52945 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDX1P52945 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.2■□□□□ 0.5
PDX1P52945 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.2■□□□□ 0.5
PDX1P52945 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDX1P52945 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDX1P52945 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
PDX1P52945 NPAP1P7-201ENST00000613027 823 ntBASIC18.2■□□□□ 0.5
PDX1P52945 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.2■□□□□ 0.5
PDX1P52945 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDX1P52945 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms