Protein–RNA interactions for Protein: P49848

TAF6, Transcription initiation factor TFIID subunit 6, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF6P49848 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TAF6P49848 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TAF6P49848 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TAF6P49848 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.05■□□□□ 0.8
TAF6P49848 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.05■□□□□ 0.8
TAF6P49848 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.05■□□□□ 0.8
TAF6P49848 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TAF6P49848 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.05■□□□□ 0.8
TAF6P49848 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.05■□□□□ 0.8
TAF6P49848 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.05■□□□□ 0.8
TAF6P49848 AL359075.1-203ENST00000462729 1002 ntBASIC20.05■□□□□ 0.8
TAF6P49848 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.05■□□□□ 0.8
TAF6P49848 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.05■□□□□ 0.8
TAF6P49848 AC087388.1-201ENST00000571370 1112 ntBASIC20.05■□□□□ 0.8
TAF6P49848 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.05■□□□□ 0.8
TAF6P49848 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.05■□□□□ 0.8
TAF6P49848 AC024243.1-201ENST00000609234 778 ntBASIC20.05■□□□□ 0.8
TAF6P49848 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.05■□□□□ 0.8
TAF6P49848 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
TAF6P49848 AC112497.1-201ENST00000624824 639 ntBASIC20.05■□□□□ 0.8
TAF6P49848 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.05■□□□□ 0.8
TAF6P49848 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TAF6P49848 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TAF6P49848 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TAF6P49848 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TAF6P49848 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TAF6P49848 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TAF6P49848 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TAF6P49848 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TAF6P49848 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TAF6P49848 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.05■□□□□ 0.8
TAF6P49848 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.05■□□□□ 0.8
TAF6P49848 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.05■□□□□ 0.8
TAF6P49848 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TAF6P49848 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.04■□□□□ 0.8
TAF6P49848 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TAF6P49848 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.04■□□□□ 0.8
TAF6P49848 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TAF6P49848 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 MYC-208ENST00000641036 567 ntBASIC20.04■□□□□ 0.8
TAF6P49848 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TAF6P49848 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TAF6P49848 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TAF6P49848 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
TAF6P49848 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.03■□□□□ 0.8
TAF6P49848 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.03■□□□□ 0.8
TAF6P49848 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.03■□□□□ 0.8
TAF6P49848 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
TAF6P49848 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.03■□□□□ 0.8
TAF6P49848 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.03■□□□□ 0.8
TAF6P49848 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.03■□□□□ 0.8
TAF6P49848 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.03■□□□□ 0.8
TAF6P49848 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
TAF6P49848 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.03■□□□□ 0.8
TAF6P49848 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.03■□□□□ 0.8
TAF6P49848 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TAF6P49848 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TAF6P49848 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TAF6P49848 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TAF6P49848 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.03■□□□□ 0.8
TAF6P49848 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.03■□□□□ 0.8
TAF6P49848 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TAF6P49848 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.02■□□□□ 0.8
TAF6P49848 KRT8P7-201ENST00000533003 1432 ntBASIC20.02■□□□□ 0.8
TAF6P49848 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TAF6P49848 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TAF6P49848 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TAF6P49848 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.02■□□□□ 0.8
TAF6P49848 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.02■□□□□ 0.8
TAF6P49848 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TAF6P49848 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TAF6P49848 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TAF6P49848 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TAF6P49848 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TAF6P49848 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TAF6P49848 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms