Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A3P43003 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A3P43003 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SLC1A3P43003 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC1A3P43003 Z98044.1-201ENST00000632503 1764 ntBASIC17.3■□□□□ 0.36
SLC1A3P43003 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC1A3P43003 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A3P43003 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A3P43003 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A3P43003 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC1A3P43003 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A3P43003 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A3P43003 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A3P43003 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC1A3P43003 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A3P43003 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SLC1A3P43003 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SLC1A3P43003 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC1A3P43003 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.29■□□□□ 0.36
SLC1A3P43003 AC233702.5-201ENST00000584107 538 ntBASIC17.29■□□□□ 0.36
SLC1A3P43003 MIR6786-201ENST00000616843 113 ntBASIC17.29■□□□□ 0.36
SLC1A3P43003 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SLC1A3P43003 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A3P43003 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A3P43003 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A3P43003 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A3P43003 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC1A3P43003 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC1A3P43003 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC1A3P43003 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A3P43003 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A3P43003 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A3P43003 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC1A3P43003 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A3P43003 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A3P43003 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SLC1A3P43003 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC1A3P43003 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A3P43003 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A3P43003 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.28■□□□□ 0.36
SLC1A3P43003 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SLC1A3P43003 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SLC1A3P43003 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC1A3P43003 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.28■□□□□ 0.36
SLC1A3P43003 B3GAT3P1-201ENST00000471720 806 ntBASIC17.28■□□□□ 0.36
SLC1A3P43003 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A3P43003 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A3P43003 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC1A3P43003 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC1A3P43003 FSCN1P1-201ENST00000568912 1481 ntBASIC17.28■□□□□ 0.36
SLC1A3P43003 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SLC1A3P43003 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A3P43003 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A3P43003 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A3P43003 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A3P43003 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC1A3P43003 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A3P43003 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A3P43003 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A3P43003 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC1A3P43003 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.27■□□□□ 0.36
SLC1A3P43003 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SLC1A3P43003 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A3P43003 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC1A3P43003 AC018470.1-201ENST00000624790 3129 ntBASIC17.27■□□□□ 0.36
SLC1A3P43003 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A3P43003 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A3P43003 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SLC1A3P43003 AC011506.1-201ENST00000474329 610 ntBASIC17.27■□□□□ 0.36
SLC1A3P43003 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A3P43003 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC1A3P43003 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC1A3P43003 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SLC1A3P43003 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A3P43003 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC1A3P43003 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC1A3P43003 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.27■□□□□ 0.35
SLC1A3P43003 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.27■□□□□ 0.35
SLC1A3P43003 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
SLC1A3P43003 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.27■□□□□ 0.35
SLC1A3P43003 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC1A3P43003 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC1A3P43003 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SLC1A3P43003 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A3P43003 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A3P43003 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A3P43003 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A3P43003 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A3P43003 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC1A3P43003 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC1A3P43003 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A3P43003 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A3P43003 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A3P43003 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A3P43003 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC1A3P43003 FAM207BP-201ENST00000447172 505 ntBASIC17.26■□□□□ 0.35
SLC1A3P43003 AC008040.2-201ENST00000461049 708 ntBASIC17.26■□□□□ 0.35
SLC1A3P43003 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC1A3P43003 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A3P43003 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms