Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.19■□□□□ 0.34
RFC3P40938 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.19■□□□□ 0.34
RFC3P40938 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.19■□□□□ 0.34
RFC3P40938 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.19■□□□□ 0.34
RFC3P40938 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC3P40938 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC3P40938 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC3P40938 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RFC3P40938 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC3P40938 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC3P40938 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC3P40938 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RFC3P40938 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC3P40938 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC3P40938 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC3P40938 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC3P40938 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC3P40938 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC3P40938 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RFC3P40938 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.18■□□□□ 0.34
RFC3P40938 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.18■□□□□ 0.34
RFC3P40938 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
RFC3P40938 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.18■□□□□ 0.34
RFC3P40938 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RFC3P40938 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.18■□□□□ 0.34
RFC3P40938 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFC3P40938 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC3P40938 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC3P40938 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFC3P40938 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFC3P40938 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.18■□□□□ 0.34
RFC3P40938 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.18■□□□□ 0.34
RFC3P40938 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.18■□□□□ 0.34
RFC3P40938 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.18■□□□□ 0.34
RFC3P40938 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.18■□□□□ 0.34
RFC3P40938 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.18■□□□□ 0.34
RFC3P40938 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.18■□□□□ 0.34
RFC3P40938 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC3P40938 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RFC3P40938 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RFC3P40938 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RFC3P40938 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC3P40938 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC3P40938 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFC3P40938 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.18■□□□□ 0.34
RFC3P40938 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RFC3P40938 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
RFC3P40938 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RFC3P40938 TEX21P-204ENST00000641479 1693 ntBASIC17.17■□□□□ 0.34
RFC3P40938 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RFC3P40938 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFC3P40938 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RFC3P40938 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFC3P40938 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.17■□□□□ 0.34
RFC3P40938 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.17■□□□□ 0.34
RFC3P40938 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFC3P40938 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RFC3P40938 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFC3P40938 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFC3P40938 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RFC3P40938 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.17■□□□□ 0.34
RFC3P40938 UPK3BP1-201ENST00000428678 509 ntBASIC17.17■□□□□ 0.34
RFC3P40938 HOMER2P1-201ENST00000455653 964 ntBASIC17.17■□□□□ 0.34
RFC3P40938 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.17■□□□□ 0.34
RFC3P40938 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.17■□□□□ 0.34
RFC3P40938 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFC3P40938 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.17■□□□□ 0.34
RFC3P40938 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RFC3P40938 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.17■□□□□ 0.34
RFC3P40938 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.17■□□□□ 0.34
RFC3P40938 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.17■□□□□ 0.34
RFC3P40938 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RFC3P40938 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RFC3P40938 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RFC3P40938 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.17■□□□□ 0.34
RFC3P40938 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RFC3P40938 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.17■□□□□ 0.34
RFC3P40938 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RFC3P40938 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFC3P40938 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RFC3P40938 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RFC3P40938 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RFC3P40938 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFC3P40938 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC3P40938 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.16■□□□□ 0.34
RFC3P40938 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC3P40938 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
RFC3P40938 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC3P40938 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFC3P40938 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC3P40938 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RFC3P40938 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFC3P40938 AL023284.2-201ENST00000405850 579 ntBASIC17.16■□□□□ 0.34
RFC3P40938 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFC3P40938 AL671277.2-201ENST00000458060 996 ntBASIC17.16■□□□□ 0.34
RFC3P40938 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFC3P40938 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.16■□□□□ 0.34
RFC3P40938 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.16■□□□□ 0.34
RFC3P40938 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.16■□□□□ 0.34
RFC3P40938 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms