Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
COL15A1P39059 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL15A1P39059 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
COL15A1P39059 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL15A1P39059 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL15A1P39059 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL15A1P39059 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.82■■□□□ 1.4
COL15A1P39059 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.82■■□□□ 1.4
COL15A1P39059 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL15A1P39059 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC23.81■■□□□ 1.4
COL15A1P39059 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
COL15A1P39059 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL15A1P39059 BAALC-202ENST00000306391 243 ntTSL 5 BASIC23.81■■□□□ 1.4
COL15A1P39059 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL15A1P39059 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL15A1P39059 BAALC-204ENST00000330955 222 ntTSL 5 BASIC23.81■■□□□ 1.4
COL15A1P39059 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC23.81■■□□□ 1.4
COL15A1P39059 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL15A1P39059 AC104692.2-201ENST00000603054 253 ntBASIC23.81■■□□□ 1.4
COL15A1P39059 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC23.81■■□□□ 1.4
COL15A1P39059 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL15A1P39059 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC23.81■■□□□ 1.4
COL15A1P39059 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
COL15A1P39059 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL15A1P39059 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL15A1P39059 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
COL15A1P39059 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC23.81■■□□□ 1.4
COL15A1P39059 Z83836.1-201ENST00000624605 1642 ntBASIC23.81■■□□□ 1.4
COL15A1P39059 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL15A1P39059 SLC25A24-204ENST00000569674 2357 ntBASIC23.8■■□□□ 1.4
COL15A1P39059 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.8■■□□□ 1.4
COL15A1P39059 ENSA-205ENST00000361532 792 ntTSL 2 BASIC23.8■■□□□ 1.4
COL15A1P39059 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL15A1P39059 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL15A1P39059 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL15A1P39059 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC23.8■■□□□ 1.4
COL15A1P39059 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC23.8■■□□□ 1.4
COL15A1P39059 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC23.8■■□□□ 1.4
COL15A1P39059 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
COL15A1P39059 HOXB1-202ENST00000577092 1414 ntBASIC23.8■■□□□ 1.4
COL15A1P39059 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC23.8■■□□□ 1.4
COL15A1P39059 AC008556.1-201ENST00000610908 2040 ntBASIC23.8■■□□□ 1.4
COL15A1P39059 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC23.8■■□□□ 1.4
COL15A1P39059 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.8■■□□□ 1.4
COL15A1P39059 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.8■■□□□ 1.4
COL15A1P39059 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
COL15A1P39059 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC23.8■■□□□ 1.4
COL15A1P39059 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC23.8■■□□□ 1.4
COL15A1P39059 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL15A1P39059 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL15A1P39059 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL15A1P39059 FOSL1P1-201ENST00000511041 816 ntBASIC23.79■■□□□ 1.4
COL15A1P39059 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL15A1P39059 AC104390.1-201ENST00000555663 520 ntBASIC23.79■■□□□ 1.4
COL15A1P39059 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC23.79■■□□□ 1.4
COL15A1P39059 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC23.79■■□□□ 1.4
COL15A1P39059 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
COL15A1P39059 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL15A1P39059 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL15A1P39059 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL15A1P39059 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL15A1P39059 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL15A1P39059 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC23.79■■□□□ 1.4
COL15A1P39059 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC23.79■■□□□ 1.4
COL15A1P39059 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL15A1P39059 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL15A1P39059 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC23.78■■□□□ 1.4
COL15A1P39059 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC23.78■■□□□ 1.4
COL15A1P39059 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC23.78■■□□□ 1.4
COL15A1P39059 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL15A1P39059 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
COL15A1P39059 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
COL15A1P39059 AL512353.2-201ENST00000448759 1962 ntBASIC23.78■■□□□ 1.4
COL15A1P39059 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL15A1P39059 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC23.78■■□□□ 1.4
COL15A1P39059 KRT8P7-201ENST00000533003 1432 ntBASIC23.78■■□□□ 1.4
COL15A1P39059 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC23.78■■□□□ 1.4
COL15A1P39059 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL15A1P39059 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
COL15A1P39059 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC23.78■■□□□ 1.4
COL15A1P39059 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC23.78■■□□□ 1.4
COL15A1P39059 ELP6-205ENST00000439305 880 ntTSL 2 BASIC23.78■■□□□ 1.4
COL15A1P39059 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC23.78■■□□□ 1.4
COL15A1P39059 AL121772.3-201ENST00000610840 674 ntBASIC23.78■■□□□ 1.4
COL15A1P39059 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC23.78■■□□□ 1.4
COL15A1P39059 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COL15A1P39059 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC23.77■■□□□ 1.4
COL15A1P39059 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL15A1P39059 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL15A1P39059 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC23.77■■□□□ 1.4
COL15A1P39059 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC23.77■■□□□ 1.4
COL15A1P39059 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
COL15A1P39059 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC23.77■■□□□ 1.4
COL15A1P39059 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL15A1P39059 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COL15A1P39059 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL15A1P39059 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC23.77■■□□□ 1.4
COL15A1P39059 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC23.77■■□□□ 1.4
COL15A1P39059 KRT18P31-201ENST00000506277 1292 ntBASIC23.77■■□□□ 1.4
COL15A1P39059 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms