Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
PDE6BP35913 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDE6BP35913 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDE6BP35913 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDE6BP35913 AC034236.2-201ENST00000606662 1610 ntBASIC23.14■■□□□ 1.29
PDE6BP35913 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDE6BP35913 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC23.14■■□□□ 1.29
PDE6BP35913 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDE6BP35913 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDE6BP35913 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC23.13■■□□□ 1.29
PDE6BP35913 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDE6BP35913 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDE6BP35913 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
PDE6BP35913 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDE6BP35913 CDV3-207ENST00000508481 661 ntTSL 3 BASIC23.13■■□□□ 1.29
PDE6BP35913 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC23.13■■□□□ 1.29
PDE6BP35913 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
PDE6BP35913 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC23.13■■□□□ 1.29
PDE6BP35913 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC23.13■■□□□ 1.29
PDE6BP35913 AL773604.1-201ENST00000617417 272 ntBASIC23.13■■□□□ 1.29
PDE6BP35913 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
PDE6BP35913 TP73-AS1-207ENST00000624167 988 ntBASIC23.13■■□□□ 1.29
PDE6BP35913 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDE6BP35913 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDE6BP35913 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDE6BP35913 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDE6BP35913 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PDE6BP35913 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PDE6BP35913 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
PDE6BP35913 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PDE6BP35913 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
PDE6BP35913 TLE1-202ENST00000376484 666 ntTSL 3 BASIC23.12■■□□□ 1.29
PDE6BP35913 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PDE6BP35913 MOK-208ENST00000519058 917 ntTSL 2 BASIC23.12■■□□□ 1.29
PDE6BP35913 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC23.12■■□□□ 1.29
PDE6BP35913 AP005901.3-202ENST00000581653 237 ntBASIC23.12■■□□□ 1.29
PDE6BP35913 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC23.12■■□□□ 1.29
PDE6BP35913 Z82202.1-201ENST00000623446 1880 ntBASIC23.12■■□□□ 1.29
PDE6BP35913 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
PDE6BP35913 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.12■■□□□ 1.29
PDE6BP35913 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PDE6BP35913 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDE6BP35913 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDE6BP35913 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
PDE6BP35913 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
PDE6BP35913 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC23.11■■□□□ 1.29
PDE6BP35913 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC23.11■■□□□ 1.29
PDE6BP35913 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PDE6BP35913 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PDE6BP35913 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC23.11■■□□□ 1.29
PDE6BP35913 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
PDE6BP35913 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC23.11■■□□□ 1.29
PDE6BP35913 AC006333.2-201ENST00000607957 2099 ntBASIC23.11■■□□□ 1.29
PDE6BP35913 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDE6BP35913 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDE6BP35913 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.11■■□□□ 1.29
PDE6BP35913 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PDE6BP35913 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
PDE6BP35913 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDE6BP35913 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDE6BP35913 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PDE6BP35913 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDE6BP35913 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PDE6BP35913 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDE6BP35913 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.1■■□□□ 1.29
PDE6BP35913 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDE6BP35913 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDE6BP35913 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PDE6BP35913 POM121L3P-201ENST00000419331 1163 ntBASIC23.1■■□□□ 1.29
PDE6BP35913 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC23.1■■□□□ 1.29
PDE6BP35913 FAM197Y8-203ENST00000450145 560 ntBASIC23.1■■□□□ 1.29
PDE6BP35913 MINOS1P3-201ENST00000457048 203 ntBASIC23.1■■□□□ 1.29
PDE6BP35913 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC23.1■■□□□ 1.29
PDE6BP35913 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC23.1■■□□□ 1.29
PDE6BP35913 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
PDE6BP35913 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDE6BP35913 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDE6BP35913 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC23.1■■□□□ 1.29
PDE6BP35913 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDE6BP35913 AL353692.3-201ENST00000407031 1396 ntBASIC23.1■■□□□ 1.29
PDE6BP35913 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
PDE6BP35913 KRT8P32-201ENST00000512863 1461 ntBASIC23.1■■□□□ 1.29
PDE6BP35913 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PDE6BP35913 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDE6BP35913 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDE6BP35913 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDE6BP35913 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PDE6BP35913 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.09■■□□□ 1.29
PDE6BP35913 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
PDE6BP35913 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDE6BP35913 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.09■■□□□ 1.29
PDE6BP35913 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDE6BP35913 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC23.09■■□□□ 1.29
PDE6BP35913 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PDE6BP35913 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
PDE6BP35913 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDE6BP35913 AC091607.1-201ENST00000490318 1060 ntBASIC23.09■■□□□ 1.29
PDE6BP35913 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC23.09■■□□□ 1.29
PDE6BP35913 AC011840.4-201ENST00000578471 627 ntBASIC23.09■■□□□ 1.29
PDE6BP35913 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms