Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CD40P25942 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD40P25942 AC008556.1-201ENST00000610908 2040 ntBASIC16.21■□□□□ 0.18
CD40P25942 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CD40P25942 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD40P25942 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD40P25942 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CD40P25942 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD40P25942 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD40P25942 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD40P25942 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD40P25942 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD40P25942 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.2■□□□□ 0.18
CD40P25942 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD40P25942 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD40P25942 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.2■□□□□ 0.18
CD40P25942 AC034232.1-201ENST00000506026 1064 ntBASIC16.2■□□□□ 0.18
CD40P25942 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.2■□□□□ 0.18
CD40P25942 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CD40P25942 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.2■□□□□ 0.18
CD40P25942 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CD40P25942 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.2■□□□□ 0.18
CD40P25942 AL121956.5-201ENST00000625261 221 ntBASIC16.2■□□□□ 0.18
CD40P25942 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.2■□□□□ 0.18
CD40P25942 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD40P25942 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD40P25942 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD40P25942 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD40P25942 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD40P25942 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CD40P25942 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CD40P25942 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD40P25942 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.19■□□□□ 0.18
CD40P25942 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD40P25942 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CD40P25942 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD40P25942 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD40P25942 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD40P25942 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
CD40P25942 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.19■□□□□ 0.18
CD40P25942 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CD40P25942 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CD40P25942 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD40P25942 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CD40P25942 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD40P25942 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD40P25942 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD40P25942 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD40P25942 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD40P25942 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD40P25942 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD40P25942 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.19■□□□□ 0.18
CD40P25942 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD40P25942 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD40P25942 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CD40P25942 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD40P25942 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD40P25942 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD40P25942 AC112907.2-201ENST00000448639 330 ntBASIC16.19■□□□□ 0.18
CD40P25942 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD40P25942 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD40P25942 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.19■□□□□ 0.18
CD40P25942 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.19■□□□□ 0.18
CD40P25942 AC091076.1-201ENST00000610741 619 ntBASIC16.19■□□□□ 0.18
CD40P25942 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.19■□□□□ 0.18
CD40P25942 AC112497.1-201ENST00000624824 639 ntBASIC16.19■□□□□ 0.18
CD40P25942 AL358472.4-201ENST00000633140 710 ntBASIC16.19■□□□□ 0.18
CD40P25942 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD40P25942 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD40P25942 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD40P25942 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.19■□□□□ 0.18
CD40P25942 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD40P25942 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.19■□□□□ 0.18
CD40P25942 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD40P25942 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.19■□□□□ 0.18
CD40P25942 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD40P25942 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD40P25942 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CD40P25942 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CD40P25942 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.18■□□□□ 0.18
CD40P25942 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
CD40P25942 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD40P25942 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.18■□□□□ 0.18
CD40P25942 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD40P25942 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD40P25942 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD40P25942 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD40P25942 SPDYE15P-201ENST00000424157 909 ntBASIC16.18■□□□□ 0.18
CD40P25942 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.18■□□□□ 0.18
CD40P25942 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.18■□□□□ 0.18
CD40P25942 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.18■□□□□ 0.18
CD40P25942 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.18■□□□□ 0.18
CD40P25942 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.18■□□□□ 0.18
CD40P25942 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD40P25942 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD40P25942 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD40P25942 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CD40P25942 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD40P25942 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.18■□□□□ 0.18
CD40P25942 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms