Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NFKB1P19838 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFKB1P19838 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.11■□□□□ 0.65
NFKB1P19838 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NFKB1P19838 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.11■□□□□ 0.65
NFKB1P19838 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NFKB1P19838 AC104581.1-202ENST00000635932 2618 ntBASIC19.11■□□□□ 0.65
NFKB1P19838 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
NFKB1P19838 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NFKB1P19838 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NFKB1P19838 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NFKB1P19838 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NFKB1P19838 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NFKB1P19838 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.11■□□□□ 0.65
NFKB1P19838 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NFKB1P19838 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.11■□□□□ 0.65
NFKB1P19838 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NFKB1P19838 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NFKB1P19838 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NFKB1P19838 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.11■□□□□ 0.65
NFKB1P19838 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
NFKB1P19838 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.11■□□□□ 0.65
NFKB1P19838 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.11■□□□□ 0.65
NFKB1P19838 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NFKB1P19838 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NFKB1P19838 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NFKB1P19838 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.11■□□□□ 0.65
NFKB1P19838 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NFKB1P19838 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFKB1P19838 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFKB1P19838 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NFKB1P19838 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NFKB1P19838 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFKB1P19838 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFKB1P19838 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFKB1P19838 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFKB1P19838 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFKB1P19838 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.1■□□□□ 0.65
NFKB1P19838 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.1■□□□□ 0.65
NFKB1P19838 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.1■□□□□ 0.65
NFKB1P19838 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.1■□□□□ 0.65
NFKB1P19838 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFKB1P19838 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.1■□□□□ 0.65
NFKB1P19838 AP000525.1-201ENST00000608286 694 ntBASIC19.1■□□□□ 0.65
NFKB1P19838 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFKB1P19838 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFKB1P19838 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NFKB1P19838 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFKB1P19838 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.1■□□□□ 0.65
NFKB1P19838 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFKB1P19838 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
NFKB1P19838 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
NFKB1P19838 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
NFKB1P19838 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFKB1P19838 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NFKB1P19838 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
NFKB1P19838 AC079598.2-202ENST00000546624 1451 ntBASIC19.09■□□□□ 0.65
NFKB1P19838 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFKB1P19838 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.09■□□□□ 0.65
NFKB1P19838 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.09■□□□□ 0.65
NFKB1P19838 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.09■□□□□ 0.65
NFKB1P19838 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NFKB1P19838 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFKB1P19838 UNC93B2-201ENST00000285383 730 ntBASIC19.09■□□□□ 0.65
NFKB1P19838 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.09■□□□□ 0.65
NFKB1P19838 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFKB1P19838 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.09■□□□□ 0.65
NFKB1P19838 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.09■□□□□ 0.65
NFKB1P19838 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFKB1P19838 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.09■□□□□ 0.65
NFKB1P19838 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
NFKB1P19838 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.09■□□□□ 0.65
NFKB1P19838 AL355075.4-201ENST00000554988 638 ntBASIC19.09■□□□□ 0.65
NFKB1P19838 AP005242.2-201ENST00000580065 1175 ntBASIC19.09■□□□□ 0.65
NFKB1P19838 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NFKB1P19838 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFKB1P19838 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFKB1P19838 AC005082.1-201ENST00000413042 2259 ntBASIC19.09■□□□□ 0.65
NFKB1P19838 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.09■□□□□ 0.65
NFKB1P19838 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.09■□□□□ 0.65
NFKB1P19838 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.09■□□□□ 0.65
NFKB1P19838 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFKB1P19838 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.09■□□□□ 0.65
NFKB1P19838 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFKB1P19838 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFKB1P19838 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFKB1P19838 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
NFKB1P19838 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFKB1P19838 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.09■□□□□ 0.65
NFKB1P19838 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFKB1P19838 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFKB1P19838 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFKB1P19838 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFKB1P19838 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFKB1P19838 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFKB1P19838 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NFKB1P19838 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NFKB1P19838 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NFKB1P19838 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.08■□□□□ 0.65
NFKB1P19838 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms