Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 PVRIG2P-201ENST00000435460 978 ntBASIC20.92■□□□□ 0.94
SMPD1P17405 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.92■□□□□ 0.94
SMPD1P17405 KRT17P6-201ENST00000453795 1220 ntBASIC20.92■□□□□ 0.94
SMPD1P17405 TOB2P1-201ENST00000469761 992 ntBASIC20.92■□□□□ 0.94
SMPD1P17405 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.92■□□□□ 0.94
SMPD1P17405 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.92■□□□□ 0.94
SMPD1P17405 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
SMPD1P17405 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.92■□□□□ 0.94
SMPD1P17405 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMPD1P17405 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.92■□□□□ 0.94
SMPD1P17405 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMPD1P17405 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.92■□□□□ 0.94
SMPD1P17405 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMPD1P17405 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
SMPD1P17405 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMPD1P17405 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
SMPD1P17405 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMPD1P17405 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SMPD1P17405 FAAHP1-202ENST00000446499 1238 ntBASIC20.91■□□□□ 0.94
SMPD1P17405 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SMPD1P17405 AP003733.1-201ENST00000491725 852 ntBASIC20.91■□□□□ 0.94
SMPD1P17405 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMPD1P17405 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.91■□□□□ 0.94
SMPD1P17405 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
SMPD1P17405 AC034236.2-201ENST00000606662 1610 ntBASIC20.91■□□□□ 0.94
SMPD1P17405 AL390719.2-201ENST00000606993 987 ntBASIC20.91■□□□□ 0.94
SMPD1P17405 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.91■□□□□ 0.94
SMPD1P17405 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMPD1P17405 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMPD1P17405 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.9■□□□□ 0.94
SMPD1P17405 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.9■□□□□ 0.94
SMPD1P17405 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMPD1P17405 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMPD1P17405 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.9■□□□□ 0.94
SMPD1P17405 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMPD1P17405 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMPD1P17405 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMPD1P17405 EMBP1-201ENST00000458200 901 ntBASIC20.9■□□□□ 0.94
SMPD1P17405 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.9■□□□□ 0.94
SMPD1P17405 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.9■□□□□ 0.94
SMPD1P17405 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.9■□□□□ 0.94
SMPD1P17405 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.9■□□□□ 0.94
SMPD1P17405 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
SMPD1P17405 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
SMPD1P17405 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMPD1P17405 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMPD1P17405 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.9■□□□□ 0.94
SMPD1P17405 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMPD1P17405 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SMPD1P17405 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SMPD1P17405 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.89■□□□□ 0.94
SMPD1P17405 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.89■□□□□ 0.94
SMPD1P17405 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMPD1P17405 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMPD1P17405 KRT8P10-201ENST00000450021 1447 ntBASIC20.89■□□□□ 0.94
SMPD1P17405 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMPD1P17405 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.89■□□□□ 0.94
SMPD1P17405 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.89■□□□□ 0.93
SMPD1P17405 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMPD1P17405 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.89■□□□□ 0.93
SMPD1P17405 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.89■□□□□ 0.93
SMPD1P17405 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.89■□□□□ 0.93
SMPD1P17405 FOSL1P1-201ENST00000511041 816 ntBASIC20.89■□□□□ 0.93
SMPD1P17405 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.89■□□□□ 0.93
SMPD1P17405 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.89■□□□□ 0.93
SMPD1P17405 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.89■□□□□ 0.93
SMPD1P17405 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMPD1P17405 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMPD1P17405 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.89■□□□□ 0.93
SMPD1P17405 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SMPD1P17405 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMPD1P17405 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.89■□□□□ 0.93
SMPD1P17405 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMPD1P17405 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMPD1P17405 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMPD1P17405 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMPD1P17405 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMPD1P17405 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SMPD1P17405 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMPD1P17405 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMPD1P17405 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.88■□□□□ 0.93
SMPD1P17405 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMPD1P17405 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.88■□□□□ 0.93
SMPD1P17405 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.88■□□□□ 0.93
SMPD1P17405 AC012615.1-201ENST00000565797 1299 ntBASIC20.88■□□□□ 0.93
SMPD1P17405 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.88■□□□□ 0.93
SMPD1P17405 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMPD1P17405 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.88■□□□□ 0.93
SMPD1P17405 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMPD1P17405 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMPD1P17405 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
SMPD1P17405 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.88■□□□□ 0.93
SMPD1P17405 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.88■□□□□ 0.93
SMPD1P17405 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMPD1P17405 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SMPD1P17405 FP475955.4-201ENST00000623131 1990 ntBASIC20.88■□□□□ 0.93
SMPD1P17405 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMPD1P17405 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMPD1P17405 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
SMPD1P17405 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms