Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.71■□□□□ 0.75
PDGFRAP16234 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFRAP16234 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFRAP16234 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFRAP16234 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFRAP16234 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFRAP16234 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFRAP16234 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFRAP16234 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.71■□□□□ 0.75
PDGFRAP16234 CA15P1-201ENST00000481698 905 ntBASIC19.71■□□□□ 0.75
PDGFRAP16234 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.71■□□□□ 0.75
PDGFRAP16234 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.71■□□□□ 0.75
PDGFRAP16234 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
PDGFRAP16234 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFRAP16234 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFRAP16234 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFRAP16234 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
PDGFRAP16234 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFRAP16234 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.71■□□□□ 0.75
PDGFRAP16234 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFRAP16234 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.71■□□□□ 0.75
PDGFRAP16234 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFRAP16234 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFRAP16234 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFRAP16234 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFRAP16234 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFRAP16234 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.71■□□□□ 0.75
PDGFRAP16234 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.71■□□□□ 0.75
PDGFRAP16234 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
PDGFRAP16234 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFRAP16234 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.7■□□□□ 0.74
PDGFRAP16234 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFRAP16234 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFRAP16234 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.7■□□□□ 0.74
PDGFRAP16234 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PDGFRAP16234 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.7■□□□□ 0.74
PDGFRAP16234 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.7■□□□□ 0.74
PDGFRAP16234 AL138781.2-201ENST00000617896 1843 ntBASIC19.7■□□□□ 0.74
PDGFRAP16234 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFRAP16234 AC020763.4-201ENST00000623414 4170 ntBASIC19.7■□□□□ 0.74
PDGFRAP16234 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFRAP16234 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFRAP16234 AC008622.2-201ENST00000617006 1229 ntBASIC19.7■□□□□ 0.74
PDGFRAP16234 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFRAP16234 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFRAP16234 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFRAP16234 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFRAP16234 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFRAP16234 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFRAP16234 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PDGFRAP16234 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.7■□□□□ 0.74
PDGFRAP16234 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFRAP16234 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFRAP16234 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFRAP16234 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PDGFRAP16234 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFRAP16234 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
PDGFRAP16234 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.69■□□□□ 0.74
PDGFRAP16234 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFRAP16234 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.69■□□□□ 0.74
PDGFRAP16234 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.69■□□□□ 0.74
PDGFRAP16234 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PDGFRAP16234 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.69■□□□□ 0.74
PDGFRAP16234 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFRAP16234 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFRAP16234 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.69■□□□□ 0.74
PDGFRAP16234 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.69■□□□□ 0.74
PDGFRAP16234 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFRAP16234 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.69■□□□□ 0.74
PDGFRAP16234 NAPSB-206ENST00000562112 1266 ntBASIC19.69■□□□□ 0.74
PDGFRAP16234 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
PDGFRAP16234 RCC2P3-201ENST00000418112 1537 ntBASIC19.69■□□□□ 0.74
PDGFRAP16234 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
PDGFRAP16234 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PDGFRAP16234 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFRAP16234 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.69■□□□□ 0.74
PDGFRAP16234 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFRAP16234 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFRAP16234 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.69■□□□□ 0.74
PDGFRAP16234 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFRAP16234 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFRAP16234 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFRAP16234 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.68■□□□□ 0.74
PDGFRAP16234 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFRAP16234 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFRAP16234 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.68■□□□□ 0.74
PDGFRAP16234 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFRAP16234 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.68■□□□□ 0.74
PDGFRAP16234 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
PDGFRAP16234 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
PDGFRAP16234 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFRAP16234 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.68■□□□□ 0.74
PDGFRAP16234 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
PDGFRAP16234 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFRAP16234 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.68■□□□□ 0.74
PDGFRAP16234 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.68■□□□□ 0.74
PDGFRAP16234 AC010947.1-201ENST00000623454 693 ntBASIC19.68■□□□□ 0.74
PDGFRAP16234 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.68■□□□□ 0.74
PDGFRAP16234 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFRAP16234 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms