Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGHV3-43DP0DP04 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
IGHV3-43DP0DP04 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGHV3-43DP0DP04 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
IGHV3-43DP0DP04 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGHV3-43DP0DP04 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
IGHV3-43DP0DP04 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGHV3-43DP0DP04 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
IGHV3-43DP0DP04 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IGHV3-43DP0DP04 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IGHV3-43DP0DP04 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 Z98044.1-201ENST00000632503 1764 ntBASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 KRT16P1-201ENST00000399124 1418 ntBASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 PKD1P1-201ENST00000458669 6805 ntBASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 PRORSD1P-201ENST00000295112 541 ntBASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 AC142381.4-202ENST00000563973 229 ntBASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 AF186192.3-201ENST00000583427 947 ntBASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 AL353708.3-201ENST00000610272 989 ntBASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 RCC2P6-201ENST00000526625 1557 ntBASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.62■□□□□ 0.09
IGHV3-43DP0DP04 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 AL353807.1-201ENST00000427475 662 ntBASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 AL158047.1-201ENST00000445918 881 ntBASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 AC091390.4-202ENST00000476426 537 ntBASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 AC083906.6-201ENST00000641366 219 ntBASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 AC093525.10-201ENST00000625130 1569 ntBASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IGHV3-43DP0DP04 AC009113.1-201ENST00000570267 2443 ntBASIC15.6■□□□□ 0.09
IGHV3-43DP0DP04 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.6■□□□□ 0.09
IGHV3-43DP0DP04 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IGHV3-43DP0DP04 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms