Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 KRT18P41-201ENST00000518924 1277 ntBASIC20.6■□□□□ 0.89
COL1A2P08123 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
COL1A2P08123 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.6■□□□□ 0.89
COL1A2P08123 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL1A2P08123 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
COL1A2P08123 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL1A2P08123 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL1A2P08123 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.6■□□□□ 0.89
COL1A2P08123 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.6■□□□□ 0.89
COL1A2P08123 MTMR9LP-203ENST00000426597 1545 ntBASIC20.6■□□□□ 0.89
COL1A2P08123 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL1A2P08123 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL1A2P08123 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL1A2P08123 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
COL1A2P08123 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL1A2P08123 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL1A2P08123 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
COL1A2P08123 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL1A2P08123 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.59■□□□□ 0.89
COL1A2P08123 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.59■□□□□ 0.89
COL1A2P08123 AC009065.1-201ENST00000564055 1225 ntBASIC20.59■□□□□ 0.89
COL1A2P08123 AC011498.5-201ENST00000592027 486 ntBASIC20.59■□□□□ 0.89
COL1A2P08123 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL1A2P08123 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
COL1A2P08123 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.59■□□□□ 0.89
COL1A2P08123 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL1A2P08123 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL1A2P08123 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL1A2P08123 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.59■□□□□ 0.89
COL1A2P08123 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL1A2P08123 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
COL1A2P08123 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.59■□□□□ 0.89
COL1A2P08123 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.59■□□□□ 0.89
COL1A2P08123 NPAP1P7-201ENST00000613027 823 ntBASIC20.59■□□□□ 0.89
COL1A2P08123 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.59■□□□□ 0.89
COL1A2P08123 AC083906.6-201ENST00000641366 219 ntBASIC20.59■□□□□ 0.89
COL1A2P08123 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL1A2P08123 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL1A2P08123 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL1A2P08123 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL1A2P08123 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL1A2P08123 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL1A2P08123 AC007952.6-201ENST00000573168 2673 ntBASIC20.58■□□□□ 0.89
COL1A2P08123 AC003957.1-201ENST00000625108 2673 ntBASIC20.58■□□□□ 0.89
COL1A2P08123 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.58■□□□□ 0.89
COL1A2P08123 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
COL1A2P08123 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL1A2P08123 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL1A2P08123 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL1A2P08123 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
COL1A2P08123 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL1A2P08123 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL1A2P08123 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.58■□□□□ 0.89
COL1A2P08123 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.58■□□□□ 0.89
COL1A2P08123 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.58■□□□□ 0.89
COL1A2P08123 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.58■□□□□ 0.89
COL1A2P08123 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.58■□□□□ 0.88
COL1A2P08123 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL1A2P08123 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL1A2P08123 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.58■□□□□ 0.88
COL1A2P08123 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.58■□□□□ 0.88
COL1A2P08123 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.58■□□□□ 0.88
COL1A2P08123 AL121672.3-201ENST00000608644 468 ntBASIC20.58■□□□□ 0.88
COL1A2P08123 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.58■□□□□ 0.88
COL1A2P08123 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.58■□□□□ 0.88
COL1A2P08123 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.58■□□□□ 0.88
COL1A2P08123 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL1A2P08123 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.58■□□□□ 0.88
COL1A2P08123 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL1A2P08123 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
COL1A2P08123 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COL1A2P08123 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
COL1A2P08123 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.58■□□□□ 0.88
COL1A2P08123 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.57■□□□□ 0.88
COL1A2P08123 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL1A2P08123 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL1A2P08123 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.57■□□□□ 0.88
COL1A2P08123 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.57■□□□□ 0.88
COL1A2P08123 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL1A2P08123 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL1A2P08123 AL161938.1-201ENST00000569833 2180 ntBASIC20.57■□□□□ 0.88
COL1A2P08123 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL1A2P08123 AL357033.4-201ENST00000617703 1807 ntBASIC20.57■□□□□ 0.88
COL1A2P08123 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL1A2P08123 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.57■□□□□ 0.88
COL1A2P08123 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL1A2P08123 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.57■□□□□ 0.88
COL1A2P08123 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL1A2P08123 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL1A2P08123 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.57■□□□□ 0.88
COL1A2P08123 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.57■□□□□ 0.88
COL1A2P08123 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.56■□□□□ 0.88
COL1A2P08123 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL1A2P08123 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL1A2P08123 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
COL1A2P08123 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL1A2P08123 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL1A2P08123 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
COL1A2P08123 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
COL1A2P08123 AP000593.1-201ENST00000393668 712 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms