Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB1P01920 AIRN-201ENST00000601203 4374 ntBASIC16.24■□□□□ 0.19
HLA-DQB1P01920 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB1P01920 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB1P01920 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB1P01920 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
HLA-DQB1P01920 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.24■□□□□ 0.19
HLA-DQB1P01920 KRT18P5-201ENST00000436075 1291 ntBASIC16.24■□□□□ 0.19
HLA-DQB1P01920 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DQB1P01920 AC011767.1-201ENST00000617410 1153 ntBASIC16.24■□□□□ 0.19
HLA-DQB1P01920 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB1P01920 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HLA-DQB1P01920 KRT8P8-201ENST00000434750 1448 ntBASIC16.24■□□□□ 0.19
HLA-DQB1P01920 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HLA-DQB1P01920 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DQB1P01920 AC093677.2-201ENST00000600169 1863 ntBASIC16.24■□□□□ 0.19
HLA-DQB1P01920 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
HLA-DQB1P01920 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB1P01920 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB1P01920 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.24■□□□□ 0.19
HLA-DQB1P01920 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DQB1P01920 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB1P01920 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB1P01920 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DQB1P01920 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB1P01920 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB1P01920 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 AC006015.1-201ENST00000429970 570 ntBASIC16.23■□□□□ 0.19
HLA-DQB1P01920 CYP2T1P-201ENST00000432607 1285 ntBASIC16.23■□□□□ 0.19
HLA-DQB1P01920 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 AL118508.1-201ENST00000613502 2345 ntBASIC16.23■□□□□ 0.19
HLA-DQB1P01920 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQB1P01920 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 OR10C1-204ENST00000622521 1039 ntBASIC16.22■□□□□ 0.19
HLA-DQB1P01920 AC231657.2-201ENST00000624556 255 ntBASIC16.22■□□□□ 0.19
HLA-DQB1P01920 KRT17P1-201ENST00000399211 1546 ntBASIC16.22■□□□□ 0.19
HLA-DQB1P01920 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 NKILA-202ENST00000614771 2598 ntBASIC16.22■□□□□ 0.19
HLA-DQB1P01920 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DQB1P01920 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 AC010980.2-201ENST00000587099 1412 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms