Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFBP01127 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFBP01127 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDGFBP01127 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDGFBP01127 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDGFBP01127 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDGFBP01127 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.87■□□□□ 0.61
PDGFBP01127 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDGFBP01127 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.87■□□□□ 0.61
PDGFBP01127 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDGFBP01127 AL353692.3-201ENST00000407031 1396 ntBASIC18.87■□□□□ 0.61
PDGFBP01127 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.87■□□□□ 0.61
PDGFBP01127 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
PDGFBP01127 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.87■□□□□ 0.61
PDGFBP01127 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.87■□□□□ 0.61
PDGFBP01127 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.87■□□□□ 0.61
PDGFBP01127 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.87■□□□□ 0.61
PDGFBP01127 AC145285.3-201ENST00000564603 959 ntBASIC18.87■□□□□ 0.61
PDGFBP01127 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDGFBP01127 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDGFBP01127 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDGFBP01127 AL355877.3-201ENST00000622820 899 ntBASIC18.87■□□□□ 0.61
PDGFBP01127 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDGFBP01127 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDGFBP01127 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDGFBP01127 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFBP01127 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFBP01127 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFBP01127 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFBP01127 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFBP01127 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.86■□□□□ 0.61
PDGFBP01127 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.86■□□□□ 0.61
PDGFBP01127 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFBP01127 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFBP01127 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFBP01127 YBX2P1-201ENST00000394192 760 ntBASIC18.86■□□□□ 0.61
PDGFBP01127 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFBP01127 AC004967.1-201ENST00000453589 447 ntBASIC18.86■□□□□ 0.61
PDGFBP01127 FGFR3P6-201ENST00000457012 610 ntBASIC18.86■□□□□ 0.61
PDGFBP01127 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFBP01127 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFBP01127 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.86■□□□□ 0.61
PDGFBP01127 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
PDGFBP01127 AC024563.2-201ENST00000603282 481 ntBASIC18.86■□□□□ 0.61
PDGFBP01127 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.86■□□□□ 0.61
PDGFBP01127 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFBP01127 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.86■□□□□ 0.61
PDGFBP01127 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PDGFBP01127 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.86■□□□□ 0.61
PDGFBP01127 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFBP01127 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.86■□□□□ 0.61
PDGFBP01127 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFBP01127 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.86■□□□□ 0.61
PDGFBP01127 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFBP01127 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDGFBP01127 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDGFBP01127 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.85■□□□□ 0.61
PDGFBP01127 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDGFBP01127 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PDGFBP01127 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDGFBP01127 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PDGFBP01127 HOXB1-202ENST00000577092 1414 ntBASIC18.85■□□□□ 0.61
PDGFBP01127 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.85■□□□□ 0.61
PDGFBP01127 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDGFBP01127 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.85■□□□□ 0.61
PDGFBP01127 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
PDGFBP01127 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDGFBP01127 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDGFBP01127 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.85■□□□□ 0.61
PDGFBP01127 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.85■□□□□ 0.61
PDGFBP01127 IGHV3-22-201ENST00000520721 359 ntBASIC18.85■□□□□ 0.61
PDGFBP01127 AC114341.1-201ENST00000618070 349 ntBASIC18.85■□□□□ 0.61
PDGFBP01127 AC134684.3-201ENST00000641758 218 ntBASIC18.85■□□□□ 0.61
PDGFBP01127 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PDGFBP01127 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDGFBP01127 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDGFBP01127 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDGFBP01127 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDGFBP01127 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDGFBP01127 RCC2P3-201ENST00000418112 1537 ntBASIC18.84■□□□□ 0.61
PDGFBP01127 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.84■□□□□ 0.61
PDGFBP01127 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PDGFBP01127 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFBP01127 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFBP01127 AL391422.3-201ENST00000603791 2761 ntBASIC18.84■□□□□ 0.61
PDGFBP01127 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFBP01127 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.84■□□□□ 0.61
PDGFBP01127 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFBP01127 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.84■□□□□ 0.61
PDGFBP01127 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.84■□□□□ 0.61
PDGFBP01127 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.84■□□□□ 0.61
PDGFBP01127 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.84■□□□□ 0.61
PDGFBP01127 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
PDGFBP01127 FAM197Y3-203ENST00000618346 717 ntBASIC18.84■□□□□ 0.61
PDGFBP01127 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFBP01127 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFBP01127 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFBP01127 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFBP01127 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFBP01127 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms