Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 MCCD1P1-208ENST00000445732 328 ntBASIC18.69■□□□□ 0.58
PRAMEF1O95521 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF1O95521 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF1O95521 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF1O95521 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.69■□□□□ 0.58
PRAMEF1O95521 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF1O95521 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PRAMEF1O95521 LINC01568-207ENST00000641790 1380 ntBASIC18.68■□□□□ 0.58
PRAMEF1O95521 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF1O95521 AC093525.10-201ENST00000625130 1569 ntBASIC18.68■□□□□ 0.58
PRAMEF1O95521 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF1O95521 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF1O95521 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PRAMEF1O95521 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF1O95521 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF1O95521 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF1O95521 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF1O95521 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.68■□□□□ 0.58
PRAMEF1O95521 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.68■□□□□ 0.58
PRAMEF1O95521 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.68■□□□□ 0.58
PRAMEF1O95521 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF1O95521 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.68■□□□□ 0.58
PRAMEF1O95521 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.68■□□□□ 0.58
PRAMEF1O95521 AL109659.2-201ENST00000606809 1674 ntBASIC18.68■□□□□ 0.58
PRAMEF1O95521 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF1O95521 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PRAMEF1O95521 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.68■□□□□ 0.58
PRAMEF1O95521 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.68■□□□□ 0.58
PRAMEF1O95521 MTMR9LP-203ENST00000426597 1545 ntBASIC18.68■□□□□ 0.58
PRAMEF1O95521 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF1O95521 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF1O95521 AC008556.1-201ENST00000610908 2040 ntBASIC18.67■□□□□ 0.58
PRAMEF1O95521 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF1O95521 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PRAMEF1O95521 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF1O95521 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.67■□□□□ 0.58
PRAMEF1O95521 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.67■□□□□ 0.58
PRAMEF1O95521 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF1O95521 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF1O95521 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PRAMEF1O95521 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PRAMEF1O95521 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.67■□□□□ 0.58
PRAMEF1O95521 AC010653.2-201ENST00000623505 997 ntBASIC18.67■□□□□ 0.58
PRAMEF1O95521 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
PRAMEF1O95521 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF1O95521 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF1O95521 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.67■□□□□ 0.58
PRAMEF1O95521 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF1O95521 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.67■□□□□ 0.58
PRAMEF1O95521 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF1O95521 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PRAMEF1O95521 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PRAMEF1O95521 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF1O95521 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.66■□□□□ 0.58
PRAMEF1O95521 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF1O95521 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF1O95521 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF1O95521 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.66■□□□□ 0.58
PRAMEF1O95521 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF1O95521 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF1O95521 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF1O95521 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF1O95521 AL031598.1-201ENST00000561511 1773 ntBASIC18.66■□□□□ 0.58
PRAMEF1O95521 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.66■□□□□ 0.58
PRAMEF1O95521 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PRAMEF1O95521 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PRAMEF1O95521 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF1O95521 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF1O95521 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.66■□□□□ 0.58
PRAMEF1O95521 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
PRAMEF1O95521 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF1O95521 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.66■□□□□ 0.58
PRAMEF1O95521 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF1O95521 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF1O95521 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.66■□□□□ 0.58
PRAMEF1O95521 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF1O95521 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.66■□□□□ 0.58
PRAMEF1O95521 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF1O95521 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PRAMEF1O95521 AC145285.6-201ENST00000604632 637 ntBASIC18.66■□□□□ 0.58
PRAMEF1O95521 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
PRAMEF1O95521 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PRAMEF1O95521 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.66■□□□□ 0.58
PRAMEF1O95521 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF1O95521 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.66■□□□□ 0.58
PRAMEF1O95521 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF1O95521 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF1O95521 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.66■□□□□ 0.58
PRAMEF1O95521 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF1O95521 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.65■□□□□ 0.58
PRAMEF1O95521 Z98044.1-201ENST00000632503 1764 ntBASIC18.65■□□□□ 0.58
PRAMEF1O95521 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.65■□□□□ 0.58
PRAMEF1O95521 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF1O95521 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.65■□□□□ 0.58
PRAMEF1O95521 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.65■□□□□ 0.58
PRAMEF1O95521 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF1O95521 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF1O95521 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
PRAMEF1O95521 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF1O95521 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms