Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLSTN1O94985 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.79■□□□□ 0.92
CLSTN1O94985 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
CLSTN1O94985 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLSTN1O94985 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.79■□□□□ 0.92
CLSTN1O94985 SDHAP1-207ENST00000440850 2000 ntBASIC20.79■□□□□ 0.92
CLSTN1O94985 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLSTN1O94985 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLSTN1O94985 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.79■□□□□ 0.92
CLSTN1O94985 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLSTN1O94985 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLSTN1O94985 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.79■□□□□ 0.92
CLSTN1O94985 AC012618.2-201ENST00000428058 849 ntBASIC20.79■□□□□ 0.92
CLSTN1O94985 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CLSTN1O94985 KSR1P1-201ENST00000446298 240 ntBASIC20.79■□□□□ 0.92
CLSTN1O94985 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CLSTN1O94985 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLSTN1O94985 SNORA78-201ENST00000459373 127 ntBASIC20.79■□□□□ 0.92
CLSTN1O94985 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.79■□□□□ 0.92
CLSTN1O94985 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.79■□□□□ 0.92
CLSTN1O94985 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.79■□□□□ 0.92
CLSTN1O94985 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLSTN1O94985 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.79■□□□□ 0.92
CLSTN1O94985 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLSTN1O94985 Z99916.2-201ENST00000604037 246 ntBASIC20.79■□□□□ 0.92
CLSTN1O94985 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLSTN1O94985 AL049637.2-201ENST00000641778 930 ntBASIC20.79■□□□□ 0.92
CLSTN1O94985 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.79■□□□□ 0.92
CLSTN1O94985 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLSTN1O94985 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLSTN1O94985 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CLSTN1O94985 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
CLSTN1O94985 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
CLSTN1O94985 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLSTN1O94985 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.78■□□□□ 0.92
CLSTN1O94985 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLSTN1O94985 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.78■□□□□ 0.92
CLSTN1O94985 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLSTN1O94985 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
CLSTN1O94985 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLSTN1O94985 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.78■□□□□ 0.92
CLSTN1O94985 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLSTN1O94985 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.78■□□□□ 0.92
CLSTN1O94985 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.78■□□□□ 0.92
CLSTN1O94985 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.78■□□□□ 0.92
CLSTN1O94985 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLSTN1O94985 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CLSTN1O94985 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
CLSTN1O94985 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLSTN1O94985 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLSTN1O94985 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLSTN1O94985 OVCH1-AS1-204ENST00000641955 5529 ntBASIC20.78■□□□□ 0.92
CLSTN1O94985 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLSTN1O94985 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLSTN1O94985 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLSTN1O94985 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.78■□□□□ 0.92
CLSTN1O94985 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLSTN1O94985 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLSTN1O94985 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.77■□□□□ 0.92
CLSTN1O94985 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLSTN1O94985 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CLSTN1O94985 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLSTN1O94985 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLSTN1O94985 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLSTN1O94985 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLSTN1O94985 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CLSTN1O94985 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
CLSTN1O94985 TSPY7P-201ENST00000431358 1114 ntBASIC20.77■□□□□ 0.92
CLSTN1O94985 AL355355.2-201ENST00000442321 338 ntBASIC20.77■□□□□ 0.92
CLSTN1O94985 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLSTN1O94985 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.77■□□□□ 0.92
CLSTN1O94985 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.77■□□□□ 0.92
CLSTN1O94985 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLSTN1O94985 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.77■□□□□ 0.92
CLSTN1O94985 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.77■□□□□ 0.92
CLSTN1O94985 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLSTN1O94985 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLSTN1O94985 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.77■□□□□ 0.92
CLSTN1O94985 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CLSTN1O94985 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLSTN1O94985 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLSTN1O94985 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.77■□□□□ 0.91
CLSTN1O94985 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLSTN1O94985 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CLSTN1O94985 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLSTN1O94985 LETM1P2-201ENST00000597330 2178 ntBASIC20.76■□□□□ 0.91
CLSTN1O94985 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLSTN1O94985 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLSTN1O94985 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLSTN1O94985 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLSTN1O94985 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLSTN1O94985 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CLSTN1O94985 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLSTN1O94985 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLSTN1O94985 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC20.76■□□□□ 0.91
CLSTN1O94985 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLSTN1O94985 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.76■□□□□ 0.91
CLSTN1O94985 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.76■□□□□ 0.91
CLSTN1O94985 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLSTN1O94985 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms