Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
LTN1O94822 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
LTN1O94822 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
LTN1O94822 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC24.91■■□□□ 1.58
LTN1O94822 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
LTN1O94822 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC24.91■■□□□ 1.58
LTN1O94822 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
LTN1O94822 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
LTN1O94822 MRPL3P1-201ENST00000400109 1033 ntBASIC24.91■■□□□ 1.58
LTN1O94822 AL022342.1-201ENST00000400363 863 ntBASIC24.91■■□□□ 1.58
LTN1O94822 FEM1AP3-201ENST00000403722 1741 ntBASIC24.91■■□□□ 1.58
LTN1O94822 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
LTN1O94822 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
LTN1O94822 AP002469.2-201ENST00000531724 424 ntBASIC24.91■■□□□ 1.58
LTN1O94822 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC24.91■■□□□ 1.58
LTN1O94822 AC120114.3-201ENST00000611923 658 ntBASIC24.91■■□□□ 1.58
LTN1O94822 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
LTN1O94822 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
LTN1O94822 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
LTN1O94822 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC24.91■■□□□ 1.58
LTN1O94822 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
LTN1O94822 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
LTN1O94822 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
LTN1O94822 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
LTN1O94822 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC24.9■■□□□ 1.58
LTN1O94822 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
LTN1O94822 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
LTN1O94822 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
LTN1O94822 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
LTN1O94822 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC24.9■■□□□ 1.58
LTN1O94822 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
LTN1O94822 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC24.9■■□□□ 1.58
LTN1O94822 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC24.9■■□□□ 1.58
LTN1O94822 PPOX-214ENST00000535223 664 ntTSL 3 BASIC24.9■■□□□ 1.58
LTN1O94822 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC24.9■■□□□ 1.58
LTN1O94822 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
LTN1O94822 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
LTN1O94822 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
LTN1O94822 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
LTN1O94822 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
LTN1O94822 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
LTN1O94822 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
LTN1O94822 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
LTN1O94822 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
LTN1O94822 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC24.9■■□□□ 1.58
LTN1O94822 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC24.9■■□□□ 1.58
LTN1O94822 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC24.9■■□□□ 1.58
LTN1O94822 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
LTN1O94822 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
LTN1O94822 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC24.89■■□□□ 1.58
LTN1O94822 KRT16P4-201ENST00000453883 522 ntBASIC24.89■■□□□ 1.57
LTN1O94822 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
LTN1O94822 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC24.89■■□□□ 1.57
LTN1O94822 ABR-204ENST00000543210 1049 ntTSL 2 BASIC24.89■■□□□ 1.57
LTN1O94822 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC24.89■■□□□ 1.57
LTN1O94822 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
LTN1O94822 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC24.89■■□□□ 1.57
LTN1O94822 NSUN5P1-202ENST00000421140 1535 ntBASIC24.89■■□□□ 1.57
LTN1O94822 NSUN5P2-203ENST00000457352 1529 ntBASIC24.89■■□□□ 1.57
LTN1O94822 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
LTN1O94822 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC24.89■■□□□ 1.57
LTN1O94822 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
LTN1O94822 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
LTN1O94822 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
LTN1O94822 KRT18P41-201ENST00000518924 1277 ntBASIC24.88■■□□□ 1.57
LTN1O94822 AL160237.2-201ENST00000556165 472 ntBASIC24.88■■□□□ 1.57
LTN1O94822 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
LTN1O94822 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC24.88■■□□□ 1.57
LTN1O94822 Z69720.1-201ENST00000601483 472 ntBASIC24.88■■□□□ 1.57
LTN1O94822 AC024563.2-201ENST00000603282 481 ntBASIC24.88■■□□□ 1.57
LTN1O94822 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
LTN1O94822 AL158211.5-201ENST00000623583 2518 ntBASIC24.88■■□□□ 1.57
LTN1O94822 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
LTN1O94822 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
LTN1O94822 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
LTN1O94822 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
LTN1O94822 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
LTN1O94822 AC090616.6-201ENST00000582640 721 ntBASIC24.88■■□□□ 1.57
LTN1O94822 AC005336.2-201ENST00000593183 939 ntBASIC24.88■■□□□ 1.57
LTN1O94822 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
LTN1O94822 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC24.87■■□□□ 1.57
LTN1O94822 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC24.87■■□□□ 1.57
LTN1O94822 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC24.87■■□□□ 1.57
LTN1O94822 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC24.87■■□□□ 1.57
LTN1O94822 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
LTN1O94822 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
LTN1O94822 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC24.87■■□□□ 1.57
LTN1O94822 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC24.87■■□□□ 1.57
LTN1O94822 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC24.87■■□□□ 1.57
LTN1O94822 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
LTN1O94822 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC24.87■■□□□ 1.57
LTN1O94822 AC106795.1-205ENST00000512851 1056 ntBASIC24.87■■□□□ 1.57
LTN1O94822 MIR3180-4-201ENST00000582223 153 ntBASIC24.87■■□□□ 1.57
LTN1O94822 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
LTN1O94822 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.87■■□□□ 1.57
LTN1O94822 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
LTN1O94822 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC24.86■■□□□ 1.57
LTN1O94822 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC24.86■■□□□ 1.57
LTN1O94822 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC24.86■■□□□ 1.57
LTN1O94822 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms