Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AL139288.1-201ENST00000623748 933 ntBASIC17.67■□□□□ 0.42
CACNA1AO00555 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CACNA1AO00555 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CACNA1AO00555 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CACNA1AO00555 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.66■□□□□ 0.42
CACNA1AO00555 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CACNA1AO00555 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.66■□□□□ 0.42
CACNA1AO00555 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.66■□□□□ 0.42
CACNA1AO00555 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CACNA1AO00555 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CACNA1AO00555 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CACNA1AO00555 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CACNA1AO00555 AC002472.2-201ENST00000442739 958 ntBASIC17.66■□□□□ 0.42
CACNA1AO00555 AC024563.2-201ENST00000603282 481 ntBASIC17.66■□□□□ 0.42
CACNA1AO00555 AL513190.1-201ENST00000621254 727 ntBASIC17.66■□□□□ 0.42
CACNA1AO00555 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.66■□□□□ 0.42
CACNA1AO00555 AP002414.3-201ENST00000589352 1468 ntBASIC17.66■□□□□ 0.42
CACNA1AO00555 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CACNA1AO00555 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CACNA1AO00555 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CACNA1AO00555 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.65■□□□□ 0.42
CACNA1AO00555 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA1AO00555 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CACNA1AO00555 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.65■□□□□ 0.42
CACNA1AO00555 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.65■□□□□ 0.42
CACNA1AO00555 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.65■□□□□ 0.42
CACNA1AO00555 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA1AO00555 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA1AO00555 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA1AO00555 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA1AO00555 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.65■□□□□ 0.42
CACNA1AO00555 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA1AO00555 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA1AO00555 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.65■□□□□ 0.42
CACNA1AO00555 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA1AO00555 AP002414.1-201ENST00000391405 1147 ntBASIC17.65■□□□□ 0.42
CACNA1AO00555 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.65■□□□□ 0.42
CACNA1AO00555 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA1AO00555 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.65■□□□□ 0.42
CACNA1AO00555 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA1AO00555 KRT89P-201ENST00000620027 1478 ntBASIC17.65■□□□□ 0.42
CACNA1AO00555 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA1AO00555 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA1AO00555 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA1AO00555 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA1AO00555 FEM1AP1-201ENST00000431297 1995 ntBASIC17.65■□□□□ 0.42
CACNA1AO00555 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.65■□□□□ 0.42
CACNA1AO00555 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA1AO00555 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.64■□□□□ 0.41
CACNA1AO00555 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CACNA1AO00555 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.64■□□□□ 0.41
CACNA1AO00555 RN7SL204P-201ENST00000582831 262 ntBASIC17.64■□□□□ 0.41
CACNA1AO00555 AC107918.4-202ENST00000641623 219 ntBASIC17.64■□□□□ 0.41
CACNA1AO00555 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA1AO00555 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA1AO00555 TP73-AS1-210ENST00000637775 1455 ntBASIC17.64■□□□□ 0.41
CACNA1AO00555 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.64■□□□□ 0.41
CACNA1AO00555 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA1AO00555 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.64■□□□□ 0.41
CACNA1AO00555 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA1AO00555 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA1AO00555 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA1AO00555 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA1AO00555 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CACNA1AO00555 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA1AO00555 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CACNA1AO00555 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CACNA1AO00555 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.64■□□□□ 0.41
CACNA1AO00555 PMS2P4-201ENST00000412466 1052 ntBASIC17.64■□□□□ 0.41
CACNA1AO00555 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.64■□□□□ 0.41
CACNA1AO00555 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.64■□□□□ 0.41
CACNA1AO00555 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17.64■□□□□ 0.41
CACNA1AO00555 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.64■□□□□ 0.41
CACNA1AO00555 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.64■□□□□ 0.41
CACNA1AO00555 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.64■□□□□ 0.41
CACNA1AO00555 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.64■□□□□ 0.41
CACNA1AO00555 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.64■□□□□ 0.41
CACNA1AO00555 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.64■□□□□ 0.41
CACNA1AO00555 AC092865.6-201ENST00000642101 219 ntBASIC17.64■□□□□ 0.41
CACNA1AO00555 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.64■□□□□ 0.41
CACNA1AO00555 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CACNA1AO00555 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA1AO00555 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA1AO00555 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CACNA1AO00555 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA1AO00555 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA1AO00555 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA1AO00555 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.63■□□□□ 0.41
CACNA1AO00555 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.63■□□□□ 0.41
CACNA1AO00555 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CACNA1AO00555 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA1AO00555 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.63■□□□□ 0.41
CACNA1AO00555 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA1AO00555 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA1AO00555 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA1AO00555 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA1AO00555 AL356309.3-201ENST00000624132 1934 ntBASIC17.63■□□□□ 0.41
CACNA1AO00555 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA1AO00555 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.63■□□□□ 0.41
CACNA1AO00555 AC069262.1-201ENST00000539058 672 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms