Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB4O00305 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB4O00305 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB4O00305 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB4O00305 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CACNB4O00305 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB4O00305 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.56■□□□□ 0.56
CACNB4O00305 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CACNB4O00305 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.56■□□□□ 0.56
CACNB4O00305 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.56■□□□□ 0.56
CACNB4O00305 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB4O00305 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.56■□□□□ 0.56
CACNB4O00305 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.56■□□□□ 0.56
CACNB4O00305 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB4O00305 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.56■□□□□ 0.56
CACNB4O00305 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB4O00305 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
CACNB4O00305 MYC-208ENST00000641036 567 ntBASIC18.56■□□□□ 0.56
CACNB4O00305 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CACNB4O00305 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB4O00305 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CACNB4O00305 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.56■□□□□ 0.56
CACNB4O00305 AL109659.2-201ENST00000606809 1674 ntBASIC18.56■□□□□ 0.56
CACNB4O00305 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB4O00305 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB4O00305 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
CACNB4O00305 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB4O00305 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
CACNB4O00305 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.56■□□□□ 0.56
CACNB4O00305 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CACNB4O00305 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CACNB4O00305 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.55■□□□□ 0.56
CACNB4O00305 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CACNB4O00305 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.55■□□□□ 0.56
CACNB4O00305 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB4O00305 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CACNB4O00305 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB4O00305 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CACNB4O00305 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB4O00305 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB4O00305 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB4O00305 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CACNB4O00305 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.55■□□□□ 0.56
CACNB4O00305 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.55■□□□□ 0.56
CACNB4O00305 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.55■□□□□ 0.56
CACNB4O00305 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.55■□□□□ 0.56
CACNB4O00305 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB4O00305 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB4O00305 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB4O00305 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB4O00305 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.54■□□□□ 0.56
CACNB4O00305 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB4O00305 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB4O00305 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB4O00305 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB4O00305 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.54■□□□□ 0.56
CACNB4O00305 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CACNB4O00305 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CACNB4O00305 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB4O00305 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB4O00305 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.54■□□□□ 0.56
CACNB4O00305 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB4O00305 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB4O00305 AL031133.1-201ENST00000406807 723 ntBASIC18.54■□□□□ 0.56
CACNB4O00305 AL671277.2-201ENST00000458060 996 ntBASIC18.54■□□□□ 0.56
CACNB4O00305 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.54■□□□□ 0.56
CACNB4O00305 AC034232.1-201ENST00000506026 1064 ntBASIC18.54■□□□□ 0.56
CACNB4O00305 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.54■□□□□ 0.56
CACNB4O00305 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CACNB4O00305 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.54■□□□□ 0.56
CACNB4O00305 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB4O00305 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CACNB4O00305 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.54■□□□□ 0.56
CACNB4O00305 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB4O00305 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.54■□□□□ 0.56
CACNB4O00305 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.54■□□□□ 0.56
CACNB4O00305 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB4O00305 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.54■□□□□ 0.56
CACNB4O00305 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB4O00305 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB4O00305 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB4O00305 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB4O00305 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CACNB4O00305 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB4O00305 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.54■□□□□ 0.56
CACNB4O00305 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB4O00305 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CACNB4O00305 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CACNB4O00305 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNB4O00305 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CACNB4O00305 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNB4O00305 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.53■□□□□ 0.56
CACNB4O00305 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNB4O00305 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.53■□□□□ 0.56
CACNB4O00305 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
CACNB4O00305 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNB4O00305 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CACNB4O00305 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.53■□□□□ 0.56
CACNB4O00305 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CACNB4O00305 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms