Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 FLJ38576-201ENST00000623820 2459 ntBASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 AC003102.1-202ENST00000563394 1796 ntBASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHKB-CPT1BH3BT56 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 H19-201ENST00000411754 1788 ntTSL 5 BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 AL662844.4-201ENST00000606367 2838 ntBASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 C8orf49-201ENST00000525043 1968 ntBASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
CHKB-CPT1BH3BT56 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC10.43□□□□□ -0.74
CHKB-CPT1BH3BT56 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CHKB-CPT1BH3BT56 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CHKB-CPT1BH3BT56 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CHKB-CPT1BH3BT56 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CHKB-CPT1BH3BT56 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC10.43□□□□□ -0.74
CHKB-CPT1BH3BT56 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC10.43□□□□□ -0.74
CHKB-CPT1BH3BT56 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CHKB-CPT1BH3BT56 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CHKB-CPT1BH3BT56 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms