Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.56□□□□□ -0.08
COL6A5A8TX70 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.56□□□□□ -0.08
COL6A5A8TX70 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.56□□□□□ -0.08
COL6A5A8TX70 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.56□□□□□ -0.08
COL6A5A8TX70 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.56□□□□□ -0.08
COL6A5A8TX70 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
COL6A5A8TX70 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A5A8TX70 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A5A8TX70 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A5A8TX70 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A5A8TX70 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A5A8TX70 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A5A8TX70 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.56□□□□□ -0.08
COL6A5A8TX70 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.56□□□□□ -0.08
COL6A5A8TX70 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.56□□□□□ -0.08
COL6A5A8TX70 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.56□□□□□ -0.08
COL6A5A8TX70 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.56□□□□□ -0.08
COL6A5A8TX70 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
COL6A5A8TX70 AL008721.1-201ENST00000609964 604 ntBASIC14.56□□□□□ -0.08
COL6A5A8TX70 C20orf181-201ENST00000623918 480 ntBASIC14.56□□□□□ -0.08
COL6A5A8TX70 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A5A8TX70 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC14.56□□□□□ -0.08
COL6A5A8TX70 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL6A5A8TX70 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL6A5A8TX70 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
COL6A5A8TX70 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.55□□□□□ -0.08
COL6A5A8TX70 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL6A5A8TX70 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
COL6A5A8TX70 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL6A5A8TX70 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.55□□□□□ -0.08
COL6A5A8TX70 AL353692.3-201ENST00000407031 1396 ntBASIC14.55□□□□□ -0.08
COL6A5A8TX70 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
COL6A5A8TX70 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.55□□□□□ -0.08
COL6A5A8TX70 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
COL6A5A8TX70 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL6A5A8TX70 MEIS3P1-201ENST00000495167 958 ntBASIC14.55□□□□□ -0.08
COL6A5A8TX70 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COL6A5A8TX70 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.55□□□□□ -0.08
COL6A5A8TX70 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.55□□□□□ -0.08
COL6A5A8TX70 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COL6A5A8TX70 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.55□□□□□ -0.08
COL6A5A8TX70 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.55□□□□□ -0.08
COL6A5A8TX70 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.55□□□□□ -0.08
COL6A5A8TX70 AL162377.1-201ENST00000618844 1793 ntBASIC14.55□□□□□ -0.08
COL6A5A8TX70 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL6A5A8TX70 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COL6A5A8TX70 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COL6A5A8TX70 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL6A5A8TX70 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL6A5A8TX70 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL6A5A8TX70 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL6A5A8TX70 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COL6A5A8TX70 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.55□□□□□ -0.08
COL6A5A8TX70 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
COL6A5A8TX70 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.55□□□□□ -0.08
COL6A5A8TX70 AC027612.4-201ENST00000605371 583 ntBASIC14.55□□□□□ -0.08
COL6A5A8TX70 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.55□□□□□ -0.08
COL6A5A8TX70 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.55□□□□□ -0.08
COL6A5A8TX70 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COL6A5A8TX70 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
COL6A5A8TX70 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL6A5A8TX70 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL6A5A8TX70 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL6A5A8TX70 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL6A5A8TX70 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
COL6A5A8TX70 PRSS29P-201ENST00000440800 595 ntBASIC14.54□□□□□ -0.08
COL6A5A8TX70 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.54□□□□□ -0.08
COL6A5A8TX70 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL6A5A8TX70 AC024563.2-201ENST00000603282 481 ntBASIC14.54□□□□□ -0.08
COL6A5A8TX70 Z98882.1-201ENST00000622160 2253 ntBASIC14.54□□□□□ -0.08
COL6A5A8TX70 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
COL6A5A8TX70 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.54□□□□□ -0.08
COL6A5A8TX70 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL6A5A8TX70 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
COL6A5A8TX70 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL6A5A8TX70 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL6A5A8TX70 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
COL6A5A8TX70 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.54□□□□□ -0.08
COL6A5A8TX70 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL6A5A8TX70 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL6A5A8TX70 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
COL6A5A8TX70 AC025062.2-201ENST00000605477 670 ntBASIC14.54□□□□□ -0.08
COL6A5A8TX70 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.54□□□□□ -0.08
COL6A5A8TX70 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL6A5A8TX70 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.54□□□□□ -0.08
COL6A5A8TX70 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
COL6A5A8TX70 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
COL6A5A8TX70 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC14.54□□□□□ -0.08
COL6A5A8TX70 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL6A5A8TX70 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL6A5A8TX70 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.54□□□□□ -0.08
COL6A5A8TX70 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
COL6A5A8TX70 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL6A5A8TX70 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.53□□□□□ -0.08
COL6A5A8TX70 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL6A5A8TX70 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.53□□□□□ -0.08
COL6A5A8TX70 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL6A5A8TX70 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
COL6A5A8TX70 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
COL6A5A8TX70 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms