Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 RNU6-106P-201ENST00000384405 107 ntBASIC-1.86□□□□□ -2.71
COL18A1P39060 MTATP8P2-201ENST00000435212 202 ntBASIC-1.86□□□□□ -2.71
COL18A1P39060 RNU6-303P-201ENST00000517091 106 ntBASIC-1.86□□□□□ -2.71
COL18A1P39060 SNORD45.1-201ENST00000363181 77 ntBASIC-1.87□□□□□ -2.71
COL18A1P39060 RNU6-841P-201ENST00000383872 107 ntBASIC-1.87□□□□□ -2.71
COL18A1P39060 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.88□□□□□ -2.71
COL18A1P39060 MIR4748-201ENST00000578076 82 ntBASIC-1.88□□□□□ -2.71
COL18A1P39060 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.88□□□□□ -2.71
COL18A1P39060 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.89□□□□□ -2.71
COL18A1P39060 RNA5SP215-201ENST00000363440 122 ntBASIC-1.89□□□□□ -2.71
COL18A1P39060 RNU6-608P-201ENST00000383927 104 ntBASIC-1.89□□□□□ -2.71
COL18A1P39060 MIR548AM-201ENST00000584298 74 ntBASIC-1.89□□□□□ -2.71
COL18A1P39060 SNORD116-22-201ENST00000384430 92 ntBASIC-1.9□□□□□ -2.71
COL18A1P39060 RNU6-557P-201ENST00000516842 110 ntBASIC-1.9□□□□□ -2.71
COL18A1P39060 MIR4668-201ENST00000582284 70 ntBASIC-1.9□□□□□ -2.71
COL18A1P39060 MTND4LP1-201ENST00000446263 157 ntBASIC-1.9□□□□□ -2.71
COL18A1P39060 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.91□□□□□ -2.72
COL18A1P39060 SNORA19-201ENST00000384737 128 ntBASIC-1.91□□□□□ -2.72
COL18A1P39060 MIR548AA1-201ENST00000384971 97 ntBASIC-1.91□□□□□ -2.72
COL18A1P39060 RNU6-554P-201ENST00000410466 106 ntBASIC-1.91□□□□□ -2.72
COL18A1P39060 RNU4-88P-201ENST00000411220 86 ntBASIC-1.91□□□□□ -2.72
COL18A1P39060 RNU6-255P-201ENST00000516957 105 ntBASIC-1.91□□□□□ -2.72
COL18A1P39060 MIR548V-201ENST00000584165 80 ntBASIC-1.91□□□□□ -2.72
COL18A1P39060 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.92□□□□□ -2.72
COL18A1P39060 MIR1297-201ENST00000637311 77 ntBASIC-1.92□□□□□ -2.72
COL18A1P39060 RNU6-598P-201ENST00000364017 105 ntBASIC-1.93□□□□□ -2.72
COL18A1P39060 RNU6-330P-201ENST00000363015 107 ntBASIC-1.93□□□□□ -2.72
COL18A1P39060 RNU6-686P-201ENST00000364839 107 ntBASIC-1.93□□□□□ -2.72
COL18A1P39060 RNU6-982P-201ENST00000516216 102 ntBASIC-1.93□□□□□ -2.72
COL18A1P39060 U4.4-201ENST00000620626 117 ntBASIC-1.93□□□□□ -2.72
COL18A1P39060 SNORA8.1-201ENST00000384250 140 ntBASIC-1.94□□□□□ -2.72
COL18A1P39060 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.94□□□□□ -2.72
COL18A1P39060 AC074348.1-201ENST00000426503 132 ntBASIC-1.94□□□□□ -2.72
COL18A1P39060 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.95□□□□□ -2.72
COL18A1P39060 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.95□□□□□ -2.72
COL18A1P39060 RNU6-766P-201ENST00000362478 107 ntBASIC-1.95□□□□□ -2.72
COL18A1P39060 SNORD113-2-201ENST00000391082 72 ntBASIC-1.95□□□□□ -2.72
COL18A1P39060 RNU6-380P-201ENST00000410207 107 ntBASIC-1.95□□□□□ -2.72
COL18A1P39060 MIR8053-201ENST00000613344 75 ntBASIC-1.95□□□□□ -2.72
COL18A1P39060 RNY4P9-201ENST00000363194 97 ntBASIC-1.96□□□□□ -2.72
COL18A1P39060 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.96□□□□□ -2.72
COL18A1P39060 MIR630-201ENST00000384957 97 ntBASIC-1.96□□□□□ -2.72
COL18A1P39060 RNU6-129P-201ENST00000391022 107 ntBASIC-1.96□□□□□ -2.72
COL18A1P39060 AC120024.2-201ENST00000576526 175 ntBASIC-1.96□□□□□ -2.72
COL18A1P39060 MIR4719-201ENST00000585233 84 ntBASIC-1.96□□□□□ -2.72
COL18A1P39060 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.96□□□□□ -2.72
COL18A1P39060 MIR3123-201ENST00000583417 75 ntBASIC-1.97□□□□□ -2.72
COL18A1P39060 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.98□□□□□ -2.73
COL18A1P39060 Y_RNA.520-201ENST00000384556 102 ntBASIC-1.98□□□□□ -2.73
COL18A1P39060 RNU6-604P-201ENST00000390917 100 ntBASIC-1.98□□□□□ -2.73
COL18A1P39060 RNY4P18-201ENST00000391107 89 ntBASIC-1.98□□□□□ -2.73
COL18A1P39060 MIR3170-201ENST00000582699 77 ntBASIC-1.98□□□□□ -2.73
COL18A1P39060 RNU6-668P-201ENST00000364180 107 ntBASIC-1.98□□□□□ -2.73
COL18A1P39060 MIR520D-201ENST00000385002 87 ntBASIC-1.98□□□□□ -2.73
COL18A1P39060 RNU6-959P-201ENST00000384671 107 ntBASIC-1.99□□□□□ -2.73
COL18A1P39060 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.99□□□□□ -2.73
COL18A1P39060 AC008267.6-201ENST00000441664 139 ntBASIC-1.99□□□□□ -2.73
COL18A1P39060 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.99□□□□□ -2.73
COL18A1P39060 RNA5SP106-201ENST00000517274 100 ntBASIC-1.99□□□□□ -2.73
COL18A1P39060 U2.18-201ENST00000622185 84 ntBASIC-2□□□□□ -2.73
COL18A1P39060 MIRLET7A1-201ENST00000362295 80 ntBASIC-2□□□□□ -2.73
COL18A1P39060 RNU6-247P-201ENST00000362636 107 ntBASIC-2□□□□□ -2.73
COL18A1P39060 RNA5SP173-201ENST00000364857 136 ntBASIC-2□□□□□ -2.73
COL18A1P39060 RNY4P10-201ENST00000365571 96 ntBASIC-2.01□□□□□ -2.73
COL18A1P39060 SNORD116-16-201ENST00000384533 92 ntBASIC-2.01□□□□□ -2.73
COL18A1P39060 RNU6-755P-201ENST00000364400 103 ntBASIC-2.02□□□□□ -2.73
COL18A1P39060 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.03□□□□□ -2.73
COL18A1P39060 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.03□□□□□ -2.73
COL18A1P39060 MIR548BB-201ENST00000626714 66 ntBASIC-2.03□□□□□ -2.73
COL18A1P39060 RNU6-834P-201ENST00000362367 110 ntBASIC-2.03□□□□□ -2.73
COL18A1P39060 RNU6-1056P-201ENST00000383996 107 ntBASIC-2.03□□□□□ -2.73
COL18A1P39060 RNU6-995P-201ENST00000391244 107 ntBASIC-2.03□□□□□ -2.73
COL18A1P39060 SNORD113.1-201ENST00000363280 73 ntBASIC-2.04□□□□□ -2.74
COL18A1P39060 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.04□□□□□ -2.74
COL18A1P39060 SNORA40.13-201ENST00000516379 120 ntBASIC-2.04□□□□□ -2.74
COL18A1P39060 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.05□□□□□ -2.74
COL18A1P39060 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.05□□□□□ -2.74
COL18A1P39060 RNU6-589P-201ENST00000516485 107 ntBASIC-2.05□□□□□ -2.74
COL18A1P39060 RNU6-794P-201ENST00000517261 64 ntBASIC-2.05□□□□□ -2.74
COL18A1P39060 RNU6-1128P-201ENST00000362825 109 ntBASIC-2.05□□□□□ -2.74
COL18A1P39060 RNU6-219P-201ENST00000364728 107 ntBASIC-2.05□□□□□ -2.74
COL18A1P39060 MIR509-1-201ENST00000385265 94 ntBASIC-2.05□□□□□ -2.74
COL18A1P39060 MIR509-2-201ENST00000390724 91 ntBASIC-2.05□□□□□ -2.74
COL18A1P39060 RNU6-258P-201ENST00000390884 101 ntBASIC-2.05□□□□□ -2.74
COL18A1P39060 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.05□□□□□ -2.74
COL18A1P39060 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.05□□□□□ -2.74
COL18A1P39060 SNORA27.2-201ENST00000363365 126 ntBASIC-2.06□□□□□ -2.74
COL18A1P39060 AL031737.1-201ENST00000450125 223 ntBASIC-2.06□□□□□ -2.74
COL18A1P39060 AC006160.2-201ENST00000637708 154 ntBASIC-2.06□□□□□ -2.74
COL18A1P39060 RNU6-267P-201ENST00000516714 103 ntBASIC-2.07□□□□□ -2.74
COL18A1P39060 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.08□□□□□ -2.74
COL18A1P39060 Y_RNA.703-201ENST00000516846 111 ntBASIC-2.08□□□□□ -2.74
COL18A1P39060 AP001318.4-201ENST00000616637 121 ntBASIC-2.08□□□□□ -2.74
COL18A1P39060 RNU6-497P-201ENST00000365316 104 ntBASIC-2.08□□□□□ -2.74
COL18A1P39060 RNU6-402P-201ENST00000410678 103 ntBASIC-2.08□□□□□ -2.74
COL18A1P39060 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.09□□□□□ -2.74
COL18A1P39060 RNU7-151P-201ENST00000516930 53 ntBASIC-2.1□□□□□ -2.75
COL18A1P39060 MIR3133-201ENST00000583157 78 ntBASIC-2.1□□□□□ -2.75
COL18A1P39060 RNU6-563P-201ENST00000364872 108 ntBASIC-2.1□□□□□ -2.75
COL18A1P39060 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.1□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms