Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB7Q9Y5E2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB7Q9Y5E2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB7Q9Y5E2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB7Q9Y5E2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB7Q9Y5E2 AC111152.3-201ENST00000569699 673 ntBASIC20.24■□□□□ 0.83
PCDHB7Q9Y5E2 RN7SL510P-201ENST00000581311 263 ntBASIC20.24■□□□□ 0.83
PCDHB7Q9Y5E2 AC010240.3-201ENST00000607688 395 ntBASIC20.24■□□□□ 0.83
PCDHB7Q9Y5E2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHB7Q9Y5E2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB7Q9Y5E2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB7Q9Y5E2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB7Q9Y5E2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB7Q9Y5E2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB7Q9Y5E2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB7Q9Y5E2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHB7Q9Y5E2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 LINC01521-201ENST00000504184 1943 ntBASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 MIR564-202ENST00000385049 94 ntBASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 HOXB1-202ENST00000577092 1414 ntBASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB7Q9Y5E2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 FEM1AP3-201ENST00000403722 1741 ntBASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 AC004870.1-201ENST00000315132 882 ntBASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 NUS1P1-201ENST00000446295 882 ntBASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB7Q9Y5E2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHB7Q9Y5E2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB7Q9Y5E2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB7Q9Y5E2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB7Q9Y5E2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB7Q9Y5E2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB7Q9Y5E2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB7Q9Y5E2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB7Q9Y5E2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB7Q9Y5E2 AL845331.1-201ENST00000424978 1190 ntBASIC20.21■□□□□ 0.83
PCDHB7Q9Y5E2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB7Q9Y5E2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.21■□□□□ 0.83
PCDHB7Q9Y5E2 RNF126P1-202ENST00000569893 925 ntBASIC20.21■□□□□ 0.83
PCDHB7Q9Y5E2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB7Q9Y5E2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHB7Q9Y5E2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.21■□□□□ 0.83
PCDHB7Q9Y5E2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHB7Q9Y5E2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB7Q9Y5E2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB7Q9Y5E2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHB7Q9Y5E2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
PCDHB7Q9Y5E2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHB7Q9Y5E2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB7Q9Y5E2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHB7Q9Y5E2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
PCDHB7Q9Y5E2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.2■□□□□ 0.83
PCDHB7Q9Y5E2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB7Q9Y5E2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB7Q9Y5E2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB7Q9Y5E2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB7Q9Y5E2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms