Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HCN4Q9Y3Q4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HCN4Q9Y3Q4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
HCN4Q9Y3Q4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.27■□□□□ 0.68
HCN4Q9Y3Q4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.27■□□□□ 0.68
HCN4Q9Y3Q4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HCN4Q9Y3Q4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HCN4Q9Y3Q4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.27■□□□□ 0.67
HCN4Q9Y3Q4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HCN4Q9Y3Q4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.27■□□□□ 0.67
HCN4Q9Y3Q4 AC073314.1-201ENST00000568729 2216 ntBASIC19.27■□□□□ 0.67
HCN4Q9Y3Q4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.27■□□□□ 0.67
HCN4Q9Y3Q4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCN4Q9Y3Q4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HCN4Q9Y3Q4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCN4Q9Y3Q4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HCN4Q9Y3Q4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
HCN4Q9Y3Q4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HCN4Q9Y3Q4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCN4Q9Y3Q4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCN4Q9Y3Q4 MED15P5-201ENST00000423150 992 ntBASIC19.26■□□□□ 0.67
HCN4Q9Y3Q4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.26■□□□□ 0.67
HCN4Q9Y3Q4 DNAJB3-202ENST00000449667 1266 ntBASIC19.26■□□□□ 0.67
HCN4Q9Y3Q4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.26■□□□□ 0.67
HCN4Q9Y3Q4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.26■□□□□ 0.67
HCN4Q9Y3Q4 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.26■□□□□ 0.67
HCN4Q9Y3Q4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.26■□□□□ 0.67
HCN4Q9Y3Q4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.26■□□□□ 0.67
HCN4Q9Y3Q4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCN4Q9Y3Q4 AC116351.2-201ENST00000606540 1585 ntBASIC19.26■□□□□ 0.67
HCN4Q9Y3Q4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
HCN4Q9Y3Q4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HCN4Q9Y3Q4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCN4Q9Y3Q4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.25■□□□□ 0.67
HCN4Q9Y3Q4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HCN4Q9Y3Q4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HCN4Q9Y3Q4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HCN4Q9Y3Q4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HCN4Q9Y3Q4 TFP1-202ENST00000475455 1573 ntBASIC19.25■□□□□ 0.67
HCN4Q9Y3Q4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.25■□□□□ 0.67
HCN4Q9Y3Q4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.25■□□□□ 0.67
HCN4Q9Y3Q4 AC112482.1-201ENST00000492080 688 ntBASIC19.25■□□□□ 0.67
HCN4Q9Y3Q4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.25■□□□□ 0.67
HCN4Q9Y3Q4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HCN4Q9Y3Q4 FAM197Y3-203ENST00000618346 717 ntBASIC19.25■□□□□ 0.67
HCN4Q9Y3Q4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.25■□□□□ 0.67
HCN4Q9Y3Q4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HCN4Q9Y3Q4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.25■□□□□ 0.67
HCN4Q9Y3Q4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HCN4Q9Y3Q4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
HCN4Q9Y3Q4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HCN4Q9Y3Q4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HCN4Q9Y3Q4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HCN4Q9Y3Q4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 YBX2P1-201ENST00000394192 760 ntBASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 AC090616.6-201ENST00000582640 721 ntBASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HCN4Q9Y3Q4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 AL591424.1-201ENST00000442569 1213 ntBASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 SCARNA2-201ENST00000458748 420 ntBASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 AL356488.2-201ENST00000602755 427 ntBASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 AC148477.8-201ENST00000624298 468 ntBASIC19.23■□□□□ 0.67
HCN4Q9Y3Q4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms