Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC23.92■■□□□ 1.42
CCNL1Q9UK58 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC23.92■■□□□ 1.42
CCNL1Q9UK58 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC23.92■■□□□ 1.42
CCNL1Q9UK58 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC23.92■■□□□ 1.42
CCNL1Q9UK58 AC024563.2-201ENST00000603282 481 ntBASIC23.92■■□□□ 1.42
CCNL1Q9UK58 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC23.92■■□□□ 1.42
CCNL1Q9UK58 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.92■■□□□ 1.42
CCNL1Q9UK58 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCNL1Q9UK58 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCNL1Q9UK58 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCNL1Q9UK58 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCNL1Q9UK58 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCNL1Q9UK58 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCNL1Q9UK58 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCNL1Q9UK58 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCNL1Q9UK58 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.91■■□□□ 1.42
CCNL1Q9UK58 AC243591.1-201ENST00000452967 1364 ntBASIC23.91■■□□□ 1.42
CCNL1Q9UK58 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCNL1Q9UK58 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCNL1Q9UK58 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CCNL1Q9UK58 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
CCNL1Q9UK58 MIR564-202ENST00000385049 94 ntBASIC23.91■■□□□ 1.42
CCNL1Q9UK58 PPOX-214ENST00000535223 664 ntTSL 3 BASIC23.91■■□□□ 1.42
CCNL1Q9UK58 AC009065.1-201ENST00000564055 1225 ntBASIC23.91■■□□□ 1.42
CCNL1Q9UK58 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC23.91■■□□□ 1.42
CCNL1Q9UK58 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC23.91■■□□□ 1.42
CCNL1Q9UK58 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC23.91■■□□□ 1.42
CCNL1Q9UK58 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC23.91■■□□□ 1.42
CCNL1Q9UK58 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CCNL1Q9UK58 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCNL1Q9UK58 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCNL1Q9UK58 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCNL1Q9UK58 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCNL1Q9UK58 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
CCNL1Q9UK58 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CCNL1Q9UK58 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC23.91■■□□□ 1.42
CCNL1Q9UK58 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC23.9■■□□□ 1.42
CCNL1Q9UK58 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.9■■□□□ 1.42
CCNL1Q9UK58 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCNL1Q9UK58 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC23.9■■□□□ 1.42
CCNL1Q9UK58 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC23.9■■□□□ 1.42
CCNL1Q9UK58 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC23.9■■□□□ 1.42
CCNL1Q9UK58 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCNL1Q9UK58 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCNL1Q9UK58 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCNL1Q9UK58 AL353692.3-201ENST00000407031 1396 ntBASIC23.9■■□□□ 1.42
CCNL1Q9UK58 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CCNL1Q9UK58 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
CCNL1Q9UK58 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CCNL1Q9UK58 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
CCNL1Q9UK58 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCNL1Q9UK58 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC23.89■■□□□ 1.42
CCNL1Q9UK58 PMS2P7-201ENST00000506558 1336 ntBASIC23.89■■□□□ 1.42
CCNL1Q9UK58 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
CCNL1Q9UK58 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCNL1Q9UK58 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CCNL1Q9UK58 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCNL1Q9UK58 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCNL1Q9UK58 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
CCNL1Q9UK58 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CCNL1Q9UK58 FAM220CP-201ENST00000395253 831 ntBASIC23.89■■□□□ 1.41
CCNL1Q9UK58 POM121L3P-201ENST00000419331 1163 ntBASIC23.89■■□□□ 1.41
CCNL1Q9UK58 AC093909.1-201ENST00000504731 1122 ntBASIC23.89■■□□□ 1.41
CCNL1Q9UK58 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC23.89■■□□□ 1.41
CCNL1Q9UK58 AC011840.4-201ENST00000578471 627 ntBASIC23.89■■□□□ 1.41
CCNL1Q9UK58 MIR3180-4-201ENST00000582223 153 ntBASIC23.89■■□□□ 1.41
CCNL1Q9UK58 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
CCNL1Q9UK58 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCNL1Q9UK58 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
CCNL1Q9UK58 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC23.89■■□□□ 1.41
CCNL1Q9UK58 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCNL1Q9UK58 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
CCNL1Q9UK58 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CCNL1Q9UK58 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC23.88■■□□□ 1.41
CCNL1Q9UK58 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
CCNL1Q9UK58 KATNBL1P6-202ENST00000562413 1466 ntBASIC23.88■■□□□ 1.41
CCNL1Q9UK58 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CCNL1Q9UK58 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCNL1Q9UK58 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC23.88■■□□□ 1.41
CCNL1Q9UK58 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CCNL1Q9UK58 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
CCNL1Q9UK58 FABP5-202ENST00000396359 986 ntTSL 5 BASIC23.88■■□□□ 1.41
CCNL1Q9UK58 BX842568.4-201ENST00000421222 227 ntBASIC23.88■■□□□ 1.41
CCNL1Q9UK58 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CCNL1Q9UK58 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC23.88■■□□□ 1.41
CCNL1Q9UK58 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC23.88■■□□□ 1.41
CCNL1Q9UK58 TERC-201ENST00000602385 541 ntBASIC23.88■■□□□ 1.41
CCNL1Q9UK58 AL591684.3-201ENST00000605187 298 ntBASIC23.88■■□□□ 1.41
CCNL1Q9UK58 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC23.88■■□□□ 1.41
CCNL1Q9UK58 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.88■■□□□ 1.41
CCNL1Q9UK58 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCNL1Q9UK58 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCNL1Q9UK58 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCNL1Q9UK58 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCNL1Q9UK58 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCNL1Q9UK58 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCNL1Q9UK58 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC23.87■■□□□ 1.41
CCNL1Q9UK58 AC099778.1-201ENST00000568593 1911 ntBASIC23.87■■□□□ 1.41
CCNL1Q9UK58 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC23.87■■□□□ 1.41
CCNL1Q9UK58 MIR940-201ENST00000401276 94 ntBASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms