Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDE1Q9NXR1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.22■□□□□ 0.51
NDE1Q9NXR1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDE1Q9NXR1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDE1Q9NXR1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.22■□□□□ 0.51
NDE1Q9NXR1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.22■□□□□ 0.51
NDE1Q9NXR1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NDE1Q9NXR1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NDE1Q9NXR1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDE1Q9NXR1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDE1Q9NXR1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NDE1Q9NXR1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDE1Q9NXR1 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NDE1Q9NXR1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.21■□□□□ 0.51
NDE1Q9NXR1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NDE1Q9NXR1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
NDE1Q9NXR1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NDE1Q9NXR1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NDE1Q9NXR1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.21■□□□□ 0.51
NDE1Q9NXR1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.21■□□□□ 0.51
NDE1Q9NXR1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDE1Q9NXR1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDE1Q9NXR1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDE1Q9NXR1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDE1Q9NXR1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NDE1Q9NXR1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NDE1Q9NXR1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.21■□□□□ 0.51
NDE1Q9NXR1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NDE1Q9NXR1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NDE1Q9NXR1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.5
NDE1Q9NXR1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 AC124067.4-201ENST00000519691 2379 ntBASIC18.2■□□□□ 0.5
NDE1Q9NXR1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 TNRC18P3-201ENST00000441896 2691 ntBASIC18.2■□□□□ 0.5
NDE1Q9NXR1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDE1Q9NXR1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 AL355472.2-201ENST00000422958 438 ntBASIC18.19■□□□□ 0.5
NDE1Q9NXR1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 KRT18P61-201ENST00000585825 1298 ntBASIC18.19■□□□□ 0.5
NDE1Q9NXR1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.19■□□□□ 0.5
NDE1Q9NXR1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms