Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.06■□□□□ 0.8
CISHQ9NSE2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CISHQ9NSE2 MCCD1P1-208ENST00000445732 328 ntBASIC20.06■□□□□ 0.8
CISHQ9NSE2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CISHQ9NSE2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CISHQ9NSE2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CISHQ9NSE2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.06■□□□□ 0.8
CISHQ9NSE2 AC145285.6-201ENST00000604632 637 ntBASIC20.06■□□□□ 0.8
CISHQ9NSE2 FAM87A-204ENST00000613235 858 ntBASIC20.06■□□□□ 0.8
CISHQ9NSE2 AC133561.5-201ENST00000635547 218 ntBASIC20.06■□□□□ 0.8
CISHQ9NSE2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CISHQ9NSE2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
CISHQ9NSE2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CISHQ9NSE2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CISHQ9NSE2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.06■□□□□ 0.8
CISHQ9NSE2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CISHQ9NSE2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CISHQ9NSE2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.05■□□□□ 0.8
CISHQ9NSE2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.05■□□□□ 0.8
CISHQ9NSE2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CISHQ9NSE2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CISHQ9NSE2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CISHQ9NSE2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CISHQ9NSE2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
CISHQ9NSE2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CISHQ9NSE2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CISHQ9NSE2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CISHQ9NSE2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CISHQ9NSE2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.05■□□□□ 0.8
CISHQ9NSE2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CISHQ9NSE2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.05■□□□□ 0.8
CISHQ9NSE2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CISHQ9NSE2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.05■□□□□ 0.8
CISHQ9NSE2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CISHQ9NSE2 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CISHQ9NSE2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CISHQ9NSE2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CISHQ9NSE2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.04■□□□□ 0.8
CISHQ9NSE2 KRT18P22-201ENST00000402024 1347 ntBASIC20.04■□□□□ 0.8
CISHQ9NSE2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.04■□□□□ 0.8
CISHQ9NSE2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CISHQ9NSE2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
CISHQ9NSE2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CISHQ9NSE2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CISHQ9NSE2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.04■□□□□ 0.8
CISHQ9NSE2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CISHQ9NSE2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.04■□□□□ 0.8
CISHQ9NSE2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CISHQ9NSE2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.04■□□□□ 0.8
CISHQ9NSE2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CISHQ9NSE2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CISHQ9NSE2 AC012306.2-201ENST00000609350 630 ntBASIC20.04■□□□□ 0.8
CISHQ9NSE2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CISHQ9NSE2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CISHQ9NSE2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CISHQ9NSE2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CISHQ9NSE2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CISHQ9NSE2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CISHQ9NSE2 Z98044.1-201ENST00000632503 1764 ntBASIC20.03■□□□□ 0.8
CISHQ9NSE2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CISHQ9NSE2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CISHQ9NSE2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CISHQ9NSE2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CISHQ9NSE2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.03■□□□□ 0.8
CISHQ9NSE2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CISHQ9NSE2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CISHQ9NSE2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CISHQ9NSE2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.03■□□□□ 0.8
CISHQ9NSE2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CISHQ9NSE2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CISHQ9NSE2 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.03■□□□□ 0.8
CISHQ9NSE2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.03■□□□□ 0.8
CISHQ9NSE2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.03■□□□□ 0.8
CISHQ9NSE2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CISHQ9NSE2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.03■□□□□ 0.8
CISHQ9NSE2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.03■□□□□ 0.8
CISHQ9NSE2 AL357033.4-201ENST00000617703 1807 ntBASIC20.03■□□□□ 0.8
CISHQ9NSE2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CISHQ9NSE2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CISHQ9NSE2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CISHQ9NSE2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.03■□□□□ 0.8
CISHQ9NSE2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CISHQ9NSE2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CISHQ9NSE2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CISHQ9NSE2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CISHQ9NSE2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CISHQ9NSE2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.02■□□□□ 0.8
CISHQ9NSE2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CISHQ9NSE2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CISHQ9NSE2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CISHQ9NSE2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CISHQ9NSE2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CISHQ9NSE2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.02■□□□□ 0.8
CISHQ9NSE2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.02■□□□□ 0.8
CISHQ9NSE2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.02■□□□□ 0.8
CISHQ9NSE2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CISHQ9NSE2 AC211429.1-201ENST00000415277 523 ntBASIC20.02■□□□□ 0.8
CISHQ9NSE2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.02■□□□□ 0.8
CISHQ9NSE2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.02■□□□□ 0.8
CISHQ9NSE2 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms