Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RPS2P28-201ENST00000314255 741 ntBASIC17.49■□□□□ 0.39
CHD8Q9HCK8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHD8Q9HCK8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
CHD8Q9HCK8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.49■□□□□ 0.39
CHD8Q9HCK8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.49■□□□□ 0.39
CHD8Q9HCK8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.49■□□□□ 0.39
CHD8Q9HCK8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.49■□□□□ 0.39
CHD8Q9HCK8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
CHD8Q9HCK8 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.49■□□□□ 0.39
CHD8Q9HCK8 MTDHP3-201ENST00000594186 672 ntBASIC17.49■□□□□ 0.39
CHD8Q9HCK8 AC010240.3-201ENST00000607688 395 ntBASIC17.49■□□□□ 0.39
CHD8Q9HCK8 MIR6752-201ENST00000618442 71 ntBASIC17.49■□□□□ 0.39
CHD8Q9HCK8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHD8Q9HCK8 AC002310.6-201ENST00000624451 1377 ntBASIC17.49■□□□□ 0.39
CHD8Q9HCK8 AP005117.1-201ENST00000584346 1413 ntBASIC17.49■□□□□ 0.39
CHD8Q9HCK8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHD8Q9HCK8 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.49■□□□□ 0.39
CHD8Q9HCK8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.49■□□□□ 0.39
CHD8Q9HCK8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHD8Q9HCK8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CHD8Q9HCK8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHD8Q9HCK8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.49■□□□□ 0.39
CHD8Q9HCK8 SIGLEC30P-201ENST00000455569 941 ntBASIC17.49■□□□□ 0.39
CHD8Q9HCK8 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.49■□□□□ 0.39
CHD8Q9HCK8 AL008721.1-201ENST00000609964 604 ntBASIC17.49■□□□□ 0.39
CHD8Q9HCK8 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHD8Q9HCK8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHD8Q9HCK8 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CHD8Q9HCK8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHD8Q9HCK8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 AC021087.4-201ENST00000563761 564 ntBASIC17.48■□□□□ 0.39
CHD8Q9HCK8 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 Z92544.3-201ENST00000624747 417 ntBASIC17.48■□□□□ 0.39
CHD8Q9HCK8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 AC121338.2-201ENST00000622535 1744 ntBASIC17.48■□□□□ 0.39
CHD8Q9HCK8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 GAPDHP21-201ENST00000450301 1010 ntBASIC17.48■□□□□ 0.39
CHD8Q9HCK8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHD8Q9HCK8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 AP003733.1-201ENST00000491725 852 ntBASIC17.47■□□□□ 0.39
CHD8Q9HCK8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 AC025062.2-201ENST00000605477 670 ntBASIC17.47■□□□□ 0.39
CHD8Q9HCK8 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHD8Q9HCK8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHD8Q9HCK8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CHD8Q9HCK8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.46■□□□□ 0.39
CHD8Q9HCK8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHD8Q9HCK8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHD8Q9HCK8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CHD8Q9HCK8 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHD8Q9HCK8 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHD8Q9HCK8 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.46■□□□□ 0.39
CHD8Q9HCK8 MCCD1P1-208ENST00000445732 328 ntBASIC17.46■□□□□ 0.39
CHD8Q9HCK8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms