Protein–RNA interactions for Protein: Q9HCJ2

LRRC4C, Leucine-rich repeat-containing protein 4C, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4CQ9HCJ2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4CQ9HCJ2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4CQ9HCJ2 AC106820.2-201ENST00000563775 3264 ntBASIC19.32■□□□□ 0.68
LRRC4CQ9HCJ2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC4CQ9HCJ2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4CQ9HCJ2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
LRRC4CQ9HCJ2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LRRC4CQ9HCJ2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC4CQ9HCJ2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4CQ9HCJ2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRC4CQ9HCJ2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4CQ9HCJ2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4CQ9HCJ2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4CQ9HCJ2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRC4CQ9HCJ2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4CQ9HCJ2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.31■□□□□ 0.68
LRRC4CQ9HCJ2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4CQ9HCJ2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4CQ9HCJ2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4CQ9HCJ2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4CQ9HCJ2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRC4CQ9HCJ2 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.31■□□□□ 0.68
LRRC4CQ9HCJ2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.31■□□□□ 0.68
LRRC4CQ9HCJ2 AL121829.2-201ENST00000620908 328 ntBASIC19.31■□□□□ 0.68
LRRC4CQ9HCJ2 AL499627.1-201ENST00000569373 2188 ntBASIC19.31■□□□□ 0.68
LRRC4CQ9HCJ2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4CQ9HCJ2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4CQ9HCJ2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4CQ9HCJ2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LRRC4CQ9HCJ2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4CQ9HCJ2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4CQ9HCJ2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 ESPNP-201ENST00000270691 2015 ntBASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.3■□□□□ 0.68
LRRC4CQ9HCJ2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 PNMA6B-201ENST00000538162 1200 ntBASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.29■□□□□ 0.68
LRRC4CQ9HCJ2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms