Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1BQ9H9Y6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 AC093484.2-201ENST00000580996 2166 ntBASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.61■□□□□ 0.57
POLR1BQ9H9Y6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 DPP3P2-201ENST00000416030 1696 ntBASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 AC009947.2-201ENST00000444014 672 ntBASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 AC008040.2-201ENST00000461049 708 ntBASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 KRT126P-201ENST00000549467 1181 ntBASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 HLA-A-209ENST00000638375 975 ntBASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1BQ9H9Y6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 AC007663.1-201ENST00000438948 1240 ntBASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
POLR1BQ9H9Y6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
POLR1BQ9H9Y6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
POLR1BQ9H9Y6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.58■□□□□ 0.57
POLR1BQ9H9Y6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.58■□□□□ 0.57
POLR1BQ9H9Y6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
POLR1BQ9H9Y6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.58■□□□□ 0.57
POLR1BQ9H9Y6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
POLR1BQ9H9Y6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.58■□□□□ 0.56
POLR1BQ9H9Y6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.58■□□□□ 0.56
POLR1BQ9H9Y6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
POLR1BQ9H9Y6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR1BQ9H9Y6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.58■□□□□ 0.56
POLR1BQ9H9Y6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.58■□□□□ 0.56
POLR1BQ9H9Y6 AL512604.3-201ENST00000569583 964 ntBASIC18.58■□□□□ 0.56
POLR1BQ9H9Y6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.58■□□□□ 0.56
POLR1BQ9H9Y6 AL121956.5-201ENST00000625261 221 ntBASIC18.58■□□□□ 0.56
POLR1BQ9H9Y6 AC141257.4-201ENST00000634557 245 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms