Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PTPN23Q9H3S7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
PTPN23Q9H3S7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC28.35■■■□□ 2.13
PTPN23Q9H3S7 KRT18P41-201ENST00000518924 1277 ntBASIC28.35■■■□□ 2.13
PTPN23Q9H3S7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC28.35■■■□□ 2.13
PTPN23Q9H3S7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
PTPN23Q9H3S7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC28.35■■■□□ 2.13
PTPN23Q9H3S7 KRT8P50-201ENST00000562022 1438 ntBASIC28.35■■■□□ 2.13
PTPN23Q9H3S7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PTPN23Q9H3S7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PTPN23Q9H3S7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC28.35■■■□□ 2.13
PTPN23Q9H3S7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PTPN23Q9H3S7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
PTPN23Q9H3S7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PTPN23Q9H3S7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC28.35■■■□□ 2.13
PTPN23Q9H3S7 AC007952.6-201ENST00000573168 2673 ntBASIC28.34■■■□□ 2.13
PTPN23Q9H3S7 AC003957.1-201ENST00000625108 2673 ntBASIC28.34■■■□□ 2.13
PTPN23Q9H3S7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
PTPN23Q9H3S7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC28.34■■■□□ 2.13
PTPN23Q9H3S7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PTPN23Q9H3S7 AL049812.1-201ENST00000432563 2267 ntBASIC28.34■■■□□ 2.13
PTPN23Q9H3S7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
PTPN23Q9H3S7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC28.34■■■□□ 2.13
PTPN23Q9H3S7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
PTPN23Q9H3S7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC28.34■■■□□ 2.13
PTPN23Q9H3S7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PTPN23Q9H3S7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC28.34■■■□□ 2.13
PTPN23Q9H3S7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
PTPN23Q9H3S7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
PTPN23Q9H3S7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PTPN23Q9H3S7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PTPN23Q9H3S7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
PTPN23Q9H3S7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC28.33■■■□□ 2.13
PTPN23Q9H3S7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
PTPN23Q9H3S7 MIR662-201ENST00000384847 95 ntBASIC28.33■■■□□ 2.13
PTPN23Q9H3S7 AP002383.4-201ENST00000442518 975 ntBASIC28.33■■■□□ 2.13
PTPN23Q9H3S7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC28.33■■■□□ 2.13
PTPN23Q9H3S7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
PTPN23Q9H3S7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC28.33■■■□□ 2.13
PTPN23Q9H3S7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PTPN23Q9H3S7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
PTPN23Q9H3S7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC28.33■■■□□ 2.13
PTPN23Q9H3S7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC28.33■■■□□ 2.13
PTPN23Q9H3S7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
PTPN23Q9H3S7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PTPN23Q9H3S7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
PTPN23Q9H3S7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC28.32■■■□□ 2.12
PTPN23Q9H3S7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
PTPN23Q9H3S7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC28.32■■■□□ 2.12
PTPN23Q9H3S7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC28.32■■■□□ 2.12
PTPN23Q9H3S7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PTPN23Q9H3S7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC28.32■■■□□ 2.12
PTPN23Q9H3S7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
PTPN23Q9H3S7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PTPN23Q9H3S7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
PTPN23Q9H3S7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PTPN23Q9H3S7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC28.32■■■□□ 2.12
PTPN23Q9H3S7 AL121894.2-201ENST00000602977 491 ntBASIC28.32■■■□□ 2.12
PTPN23Q9H3S7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
PTPN23Q9H3S7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PTPN23Q9H3S7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PTPN23Q9H3S7 AC016734.2-201ENST00000624325 1377 ntBASIC28.32■■■□□ 2.12
PTPN23Q9H3S7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
PTPN23Q9H3S7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC28.31■■■□□ 2.12
PTPN23Q9H3S7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PTPN23Q9H3S7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PTPN23Q9H3S7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PTPN23Q9H3S7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
PTPN23Q9H3S7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC28.31■■■□□ 2.12
PTPN23Q9H3S7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
PTPN23Q9H3S7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PTPN23Q9H3S7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
PTPN23Q9H3S7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
PTPN23Q9H3S7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC28.31■■■□□ 2.12
PTPN23Q9H3S7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC28.31■■■□□ 2.12
PTPN23Q9H3S7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC28.31■■■□□ 2.12
PTPN23Q9H3S7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC28.31■■■□□ 2.12
PTPN23Q9H3S7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC28.31■■■□□ 2.12
PTPN23Q9H3S7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
PTPN23Q9H3S7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
PTPN23Q9H3S7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
PTPN23Q9H3S7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
PTPN23Q9H3S7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PTPN23Q9H3S7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PTPN23Q9H3S7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PTPN23Q9H3S7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC28.3■■■□□ 2.12
PTPN23Q9H3S7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PTPN23Q9H3S7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PTPN23Q9H3S7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
PTPN23Q9H3S7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
PTPN23Q9H3S7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC28.3■■■□□ 2.12
PTPN23Q9H3S7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
PTPN23Q9H3S7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC28.3■■■□□ 2.12
PTPN23Q9H3S7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC28.29■■■□□ 2.12
PTPN23Q9H3S7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PTPN23Q9H3S7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
PTPN23Q9H3S7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC28.29■■■□□ 2.12
PTPN23Q9H3S7 TPSP2-201ENST00000561760 610 ntBASIC28.29■■■□□ 2.12
PTPN23Q9H3S7 AC092119.3-201ENST00000612618 583 ntBASIC28.29■■■□□ 2.12
PTPN23Q9H3S7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC28.29■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms