Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC10.93□□□□□ -0.66
CYSTM1Q9H1C7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 AL391121.1-201ENST00000607967 1349 ntBASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 AC079328.2-201ENST00000561241 3354 ntBASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC10.92□□□□□ -0.66
CYSTM1Q9H1C7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 FP325331.1-202ENST00000623531 1380 ntBASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 AC007686.3-201ENST00000619017 3487 ntBASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 AC116050.2-201ENST00000612102 1779 ntBASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 MIR762-201ENST00000390236 83 ntBASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms