Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 LINC00543-201ENST00000567234 1845 ntBASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 TPM3-201ENST00000271850 1219 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 AC090559.2-201ENST00000366360 430 ntTSL 5 BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 RNU6-1215P-201ENST00000384441 102 ntBASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 MICU1-203ENST00000398763 1224 ntTSL 2 BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 AL365396.1-201ENST00000430854 671 ntBASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 UBQLN1P1-207ENST00000441056 1169 ntBASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 AC105420.1-201ENST00000504389 582 ntBASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 AC109471.1-201ENST00000511631 612 ntBASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 OR8L1P-201ENST00000534005 955 ntBASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 ZNF321P-202ENST00000550843 495 ntBASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 AL132857.1-201ENST00000555180 708 ntBASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 GDPD1-206ENST00000581276 1055 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 ELOCP28-201ENST00000590044 317 ntBASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 MTCO1P1-201ENST00000624263 1081 ntBASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 AL139254.3-201ENST00000641097 674 ntBASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 AL353743.3-201ENST00000442109 1468 ntBASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC11.68□□□□□ -0.54
KRTAP3-3Q9BYR6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 AL355607.2-201ENST00000563268 1395 ntTSL 5 BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 IL15-203ENST00000394159 1545 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 LINC02071-201ENST00000514726 1723 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 ZNF29P-201ENST00000225587 168 ntBASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 KRTAP4-8-202ENST00000333822 1161 ntAPPRIS P2 BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 Y_RNA.3-201ENST00000362331 103 ntBASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 HES6-205ENST00000409356 528 ntTSL 2 BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 RPS24P7-201ENST00000416921 246 ntBASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 CCDC58P2-201ENST00000417131 366 ntBASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 Z99758.1-201ENST00000432081 368 ntTSL 3 BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 MTCO1P19-201ENST00000443487 500 ntBASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 EEF1B2P5-201ENST00000444820 548 ntBASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 RPL7P16-201ENST00000479738 738 ntBASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 TMEM161B-AS1-204ENST00000504636 1039 ntTSL 2 BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 AC093763.2-201ENST00000505334 1223 ntBASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 AC009097.3-201ENST00000563557 1018 ntBASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 AC106785.3-201ENST00000564064 847 ntBASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 AC133569.1-201ENST00000564327 373 ntBASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 BNIP3P33-201ENST00000598912 569 ntBASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 AC008945.2-201ENST00000606056 604 ntBASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 UBXN8-209ENST00000620074 1058 ntTSL 5 BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 AC079684.1-201ENST00000621405 437 ntBASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 MTND5P42-201ENST00000637720 498 ntBASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 AC099654.11-201ENST00000638857 294 ntBASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 OR8B1P-202ENST00000641132 1178 ntBASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 AL391380.1-201ENST00000439300 1432 ntBASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 AC090403.1-201ENST00000584546 1352 ntTSL 2 BASIC11.67□□□□□ -0.54
KRTAP3-3Q9BYR6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC11.66□□□□□ -0.54
KRTAP3-3Q9BYR6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
KRTAP3-3Q9BYR6 NDUFA5-211ENST00000611607 1504 ntTSL 2 BASIC11.66□□□□□ -0.54
KRTAP3-3Q9BYR6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
KRTAP3-3Q9BYR6 CFI-207ENST00000618244 1345 ntTSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms