Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
THUMPD3Q9BV44 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
THUMPD3Q9BV44 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18■□□□□ 0.47
THUMPD3Q9BV44 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
THUMPD3Q9BV44 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
THUMPD3Q9BV44 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
THUMPD3Q9BV44 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
THUMPD3Q9BV44 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18■□□□□ 0.47
THUMPD3Q9BV44 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18■□□□□ 0.47
THUMPD3Q9BV44 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18■□□□□ 0.47
THUMPD3Q9BV44 KRT18P6-201ENST00000555540 1265 ntBASIC18■□□□□ 0.47
THUMPD3Q9BV44 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
THUMPD3Q9BV44 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18■□□□□ 0.47
THUMPD3Q9BV44 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
THUMPD3Q9BV44 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18■□□□□ 0.47
THUMPD3Q9BV44 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
THUMPD3Q9BV44 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18■□□□□ 0.47
THUMPD3Q9BV44 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18■□□□□ 0.47
THUMPD3Q9BV44 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
THUMPD3Q9BV44 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18■□□□□ 0.47
THUMPD3Q9BV44 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18■□□□□ 0.47
THUMPD3Q9BV44 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
THUMPD3Q9BV44 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18■□□□□ 0.47
THUMPD3Q9BV44 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
THUMPD3Q9BV44 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
THUMPD3Q9BV44 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 AL121829.2-201ENST00000620908 328 ntBASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.98■□□□□ 0.47
THUMPD3Q9BV44 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
THUMPD3Q9BV44 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
THUMPD3Q9BV44 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
THUMPD3Q9BV44 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
THUMPD3Q9BV44 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
THUMPD3Q9BV44 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
THUMPD3Q9BV44 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
THUMPD3Q9BV44 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
THUMPD3Q9BV44 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
THUMPD3Q9BV44 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
THUMPD3Q9BV44 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
THUMPD3Q9BV44 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
THUMPD3Q9BV44 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
THUMPD3Q9BV44 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
THUMPD3Q9BV44 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
THUMPD3Q9BV44 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms