Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.58■□□□□ 0.72
CDCA3Q99618 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CDCA3Q99618 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.58■□□□□ 0.72
CDCA3Q99618 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CDCA3Q99618 AL773604.1-201ENST00000617417 272 ntBASIC19.58■□□□□ 0.72
CDCA3Q99618 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.58■□□□□ 0.72
CDCA3Q99618 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDCA3Q99618 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDCA3Q99618 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDCA3Q99618 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDCA3Q99618 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDCA3Q99618 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDCA3Q99618 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDCA3Q99618 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CDCA3Q99618 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDCA3Q99618 TCF3P1-201ENST00000423021 1937 ntBASIC19.57■□□□□ 0.72
CDCA3Q99618 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDCA3Q99618 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDCA3Q99618 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDCA3Q99618 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CDCA3Q99618 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CDCA3Q99618 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CDCA3Q99618 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.57■□□□□ 0.72
CDCA3Q99618 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CDCA3Q99618 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.57■□□□□ 0.72
CDCA3Q99618 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CDCA3Q99618 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDCA3Q99618 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.57■□□□□ 0.72
CDCA3Q99618 AC139530.3-201ENST00000620344 690 ntBASIC19.57■□□□□ 0.72
CDCA3Q99618 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.57■□□□□ 0.72
CDCA3Q99618 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDCA3Q99618 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CDCA3Q99618 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CDCA3Q99618 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.57■□□□□ 0.72
CDCA3Q99618 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDCA3Q99618 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.56■□□□□ 0.72
CDCA3Q99618 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDCA3Q99618 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CDCA3Q99618 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CDCA3Q99618 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDCA3Q99618 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDCA3Q99618 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.56■□□□□ 0.72
CDCA3Q99618 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.56■□□□□ 0.72
CDCA3Q99618 KRT8P32-201ENST00000512863 1461 ntBASIC19.56■□□□□ 0.72
CDCA3Q99618 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.56■□□□□ 0.72
CDCA3Q99618 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDCA3Q99618 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDCA3Q99618 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CDCA3Q99618 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.56■□□□□ 0.72
CDCA3Q99618 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDCA3Q99618 KRT18P13-201ENST00000400056 1290 ntBASIC19.56■□□□□ 0.72
CDCA3Q99618 NUS1P2-201ENST00000417358 873 ntBASIC19.56■□□□□ 0.72
CDCA3Q99618 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.56■□□□□ 0.72
CDCA3Q99618 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDCA3Q99618 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDCA3Q99618 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.56■□□□□ 0.72
CDCA3Q99618 AF238378.1-201ENST00000526806 358 ntBASIC19.56■□□□□ 0.72
CDCA3Q99618 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.56■□□□□ 0.72
CDCA3Q99618 AC011840.4-201ENST00000578471 627 ntBASIC19.56■□□□□ 0.72
CDCA3Q99618 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.56■□□□□ 0.72
CDCA3Q99618 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.56■□□□□ 0.72
CDCA3Q99618 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDCA3Q99618 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.56■□□□□ 0.72
CDCA3Q99618 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDCA3Q99618 Z82202.1-201ENST00000623446 1880 ntBASIC19.56■□□□□ 0.72
CDCA3Q99618 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDCA3Q99618 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CDCA3Q99618 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CDCA3Q99618 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.56■□□□□ 0.72
CDCA3Q99618 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDCA3Q99618 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDCA3Q99618 PKD1P6-201ENST00000343738 4769 ntBASIC19.55■□□□□ 0.72
CDCA3Q99618 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDCA3Q99618 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDCA3Q99618 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDCA3Q99618 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDCA3Q99618 MIR574-201ENST00000385209 96 ntBASIC19.55■□□□□ 0.72
CDCA3Q99618 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDCA3Q99618 MINOS1P3-201ENST00000457048 203 ntBASIC19.55■□□□□ 0.72
CDCA3Q99618 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.55■□□□□ 0.72
CDCA3Q99618 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.55■□□□□ 0.72
CDCA3Q99618 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.55■□□□□ 0.72
CDCA3Q99618 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CDCA3Q99618 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.55■□□□□ 0.72
CDCA3Q99618 AF228730.7-201ENST00000641842 219 ntBASIC19.55■□□□□ 0.72
CDCA3Q99618 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDCA3Q99618 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDCA3Q99618 AL353692.3-201ENST00000407031 1396 ntBASIC19.55■□□□□ 0.72
CDCA3Q99618 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.54■□□□□ 0.72
CDCA3Q99618 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDCA3Q99618 IL9RP2-201ENST00000423948 1312 ntBASIC19.54■□□□□ 0.72
CDCA3Q99618 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDCA3Q99618 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.54■□□□□ 0.72
CDCA3Q99618 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CDCA3Q99618 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CDCA3Q99618 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CDCA3Q99618 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDCA3Q99618 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDCA3Q99618 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.54■□□□□ 0.72
CDCA3Q99618 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms