Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHOX2BQ99453 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.98■□□□□ 0.63
PHOX2BQ99453 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHOX2BQ99453 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PHOX2BQ99453 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PHOX2BQ99453 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHOX2BQ99453 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHOX2BQ99453 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHOX2BQ99453 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.98■□□□□ 0.63
PHOX2BQ99453 ZNF259P1-201ENST00000407656 1365 ntBASIC18.98■□□□□ 0.63
PHOX2BQ99453 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHOX2BQ99453 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHOX2BQ99453 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHOX2BQ99453 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHOX2BQ99453 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.98■□□□□ 0.63
PHOX2BQ99453 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
PHOX2BQ99453 GPX1P2-201ENST00000429271 606 ntBASIC18.98■□□□□ 0.63
PHOX2BQ99453 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.98■□□□□ 0.63
PHOX2BQ99453 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.98■□□□□ 0.63
PHOX2BQ99453 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.98■□□□□ 0.63
PHOX2BQ99453 AC024243.1-201ENST00000609234 778 ntBASIC18.98■□□□□ 0.63
PHOX2BQ99453 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.98■□□□□ 0.63
PHOX2BQ99453 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.98■□□□□ 0.63
PHOX2BQ99453 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PHOX2BQ99453 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHOX2BQ99453 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHOX2BQ99453 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.98■□□□□ 0.63
PHOX2BQ99453 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHOX2BQ99453 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.98■□□□□ 0.63
PHOX2BQ99453 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.98■□□□□ 0.63
PHOX2BQ99453 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHOX2BQ99453 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHOX2BQ99453 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHOX2BQ99453 LINC01006-201ENST00000333319 2292 ntBASIC18.98■□□□□ 0.63
PHOX2BQ99453 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHOX2BQ99453 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.98■□□□□ 0.63
PHOX2BQ99453 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHOX2BQ99453 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PHOX2BQ99453 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PHOX2BQ99453 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHOX2BQ99453 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHOX2BQ99453 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHOX2BQ99453 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.97■□□□□ 0.63
PHOX2BQ99453 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHOX2BQ99453 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHOX2BQ99453 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.97■□□□□ 0.63
PHOX2BQ99453 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PHOX2BQ99453 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.97■□□□□ 0.63
PHOX2BQ99453 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHOX2BQ99453 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.97■□□□□ 0.63
PHOX2BQ99453 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.97■□□□□ 0.63
PHOX2BQ99453 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.97■□□□□ 0.63
PHOX2BQ99453 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.97■□□□□ 0.63
PHOX2BQ99453 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.97■□□□□ 0.63
PHOX2BQ99453 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.97■□□□□ 0.63
PHOX2BQ99453 AL160286.2-201ENST00000567150 934 ntBASIC18.97■□□□□ 0.63
PHOX2BQ99453 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.97■□□□□ 0.63
PHOX2BQ99453 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHOX2BQ99453 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PHOX2BQ99453 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHOX2BQ99453 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.97■□□□□ 0.63
PHOX2BQ99453 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHOX2BQ99453 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHOX2BQ99453 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.97■□□□□ 0.63
PHOX2BQ99453 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHOX2BQ99453 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PHOX2BQ99453 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.97■□□□□ 0.63
PHOX2BQ99453 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.97■□□□□ 0.63
PHOX2BQ99453 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
PHOX2BQ99453 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PHOX2BQ99453 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PHOX2BQ99453 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.96■□□□□ 0.63
PHOX2BQ99453 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PHOX2BQ99453 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PHOX2BQ99453 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PHOX2BQ99453 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
PHOX2BQ99453 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PHOX2BQ99453 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PHOX2BQ99453 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PHOX2BQ99453 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.96■□□□□ 0.63
PHOX2BQ99453 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.96■□□□□ 0.63
PHOX2BQ99453 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.96■□□□□ 0.63
PHOX2BQ99453 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.96■□□□□ 0.63
PHOX2BQ99453 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.96■□□□□ 0.63
PHOX2BQ99453 AC112482.1-201ENST00000492080 688 ntBASIC18.96■□□□□ 0.63
PHOX2BQ99453 AC093909.1-201ENST00000504731 1122 ntBASIC18.96■□□□□ 0.63
PHOX2BQ99453 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PHOX2BQ99453 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PHOX2BQ99453 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.96■□□□□ 0.63
PHOX2BQ99453 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.96■□□□□ 0.63
PHOX2BQ99453 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.96■□□□□ 0.63
PHOX2BQ99453 MIR7706-201ENST00000613747 67 ntBASIC18.96■□□□□ 0.63
PHOX2BQ99453 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.96■□□□□ 0.63
PHOX2BQ99453 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PHOX2BQ99453 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PHOX2BQ99453 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.96■□□□□ 0.63
PHOX2BQ99453 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PHOX2BQ99453 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PHOX2BQ99453 AC121338.2-201ENST00000622535 1744 ntBASIC18.96■□□□□ 0.63
PHOX2BQ99453 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms