Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.41■□□□□ 0.7
CSPG4P5Q96PW8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.41■□□□□ 0.7
CSPG4P5Q96PW8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.41■□□□□ 0.7
CSPG4P5Q96PW8 FITM1-202ENST00000559294 800 ntBASIC19.41■□□□□ 0.7
CSPG4P5Q96PW8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSPG4P5Q96PW8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
CSPG4P5Q96PW8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
CSPG4P5Q96PW8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSPG4P5Q96PW8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CSPG4P5Q96PW8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSPG4P5Q96PW8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSPG4P5Q96PW8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSPG4P5Q96PW8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.41■□□□□ 0.7
CSPG4P5Q96PW8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.41■□□□□ 0.7
CSPG4P5Q96PW8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CSPG4P5Q96PW8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 AL390955.1-201ENST00000428694 934 ntBASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 TSPY15P-201ENST00000457163 923 ntBASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 AC093827.2-201ENST00000512654 315 ntBASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 AC066615.1-201ENST00000640911 628 ntBASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSPG4P5Q96PW8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.39■□□□□ 0.7
CSPG4P5Q96PW8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CSPG4P5Q96PW8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.39■□□□□ 0.69
CSPG4P5Q96PW8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.39■□□□□ 0.69
CSPG4P5Q96PW8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSPG4P5Q96PW8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CSPG4P5Q96PW8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CSPG4P5Q96PW8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CSPG4P5Q96PW8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.39■□□□□ 0.69
CSPG4P5Q96PW8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSPG4P5Q96PW8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSPG4P5Q96PW8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSPG4P5Q96PW8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.39■□□□□ 0.69
CSPG4P5Q96PW8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CSPG4P5Q96PW8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CSPG4P5Q96PW8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.39■□□□□ 0.69
CSPG4P5Q96PW8 AL357033.4-201ENST00000617703 1807 ntBASIC19.39■□□□□ 0.69
CSPG4P5Q96PW8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CSPG4P5Q96PW8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSPG4P5Q96PW8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.39■□□□□ 0.69
CSPG4P5Q96PW8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.39■□□□□ 0.69
CSPG4P5Q96PW8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CSPG4P5Q96PW8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
CSPG4P5Q96PW8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CSPG4P5Q96PW8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 AL023284.2-201ENST00000405850 579 ntBASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 MIR1238-201ENST00000408483 83 ntBASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 GPAT2P1-201ENST00000444924 1672 ntBASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 AL109659.2-201ENST00000606809 1674 ntBASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CSPG4P5Q96PW8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSPG4P5Q96PW8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CSPG4P5Q96PW8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.37■□□□□ 0.69
CSPG4P5Q96PW8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CSPG4P5Q96PW8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.37■□□□□ 0.69
CSPG4P5Q96PW8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CSPG4P5Q96PW8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms