Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 FAM87A-204ENST00000613235 858 ntBASIC15.65■□□□□ 0.1
GAFA1Q96PS6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GAFA1Q96PS6 KRT18P22-201ENST00000402024 1347 ntBASIC15.65■□□□□ 0.1
GAFA1Q96PS6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.64■□□□□ 0.09
GAFA1Q96PS6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.64■□□□□ 0.09
GAFA1Q96PS6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
GAFA1Q96PS6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.64■□□□□ 0.09
GAFA1Q96PS6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
GAFA1Q96PS6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
GAFA1Q96PS6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GAFA1Q96PS6 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.64■□□□□ 0.09
GAFA1Q96PS6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
GAFA1Q96PS6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GAFA1Q96PS6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GAFA1Q96PS6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GAFA1Q96PS6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
GAFA1Q96PS6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GAFA1Q96PS6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.64■□□□□ 0.09
GAFA1Q96PS6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.64■□□□□ 0.09
GAFA1Q96PS6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
GAFA1Q96PS6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GAFA1Q96PS6 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.64■□□□□ 0.09
GAFA1Q96PS6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.64■□□□□ 0.09
GAFA1Q96PS6 AC008556.1-201ENST00000610908 2040 ntBASIC15.64■□□□□ 0.09
GAFA1Q96PS6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
GAFA1Q96PS6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GAFA1Q96PS6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
GAFA1Q96PS6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GAFA1Q96PS6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GAFA1Q96PS6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
GAFA1Q96PS6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 AC093503.3-201ENST00000624917 2352 ntBASIC15.63■□□□□ 0.09
GAFA1Q96PS6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GAFA1Q96PS6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 AL031598.1-201ENST00000561511 1773 ntBASIC15.62■□□□□ 0.09
GAFA1Q96PS6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 HMGA1P5-201ENST00000412453 271 ntBASIC15.62■□□□□ 0.09
GAFA1Q96PS6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 MIR3180-5-201ENST00000583743 153 ntBASIC15.62■□□□□ 0.09
GAFA1Q96PS6 AC012306.2-201ENST00000609350 630 ntBASIC15.62■□□□□ 0.09
GAFA1Q96PS6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.62■□□□□ 0.09
GAFA1Q96PS6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.62■□□□□ 0.09
GAFA1Q96PS6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms