Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 AC004408.2-201ENST00000623613 2777 ntBASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 AC139887.4-201ENST00000607877 719 ntBASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 CR769767.2-201ENST00000622735 460 ntBASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 AL049597.2-201ENST00000565575 961 ntBASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
PRICKLE1Q96MT3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 AC036111.1-201ENST00000533973 1582 ntBASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 AC009947.2-201ENST00000444014 672 ntBASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 AL512604.3-201ENST00000569583 964 ntBASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 AL023973.1-201ENST00000624619 620 ntBASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.41■□□□□ 0.7
PRICKLE1Q96MT3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 AL161938.1-201ENST00000569833 2180 ntBASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRICKLE1Q96MT3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms