Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 TSPY14P-201ENST00000303979 915 ntBASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 AC128688.1-201ENST00000487626 519 ntBASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 AC007613.1-201ENST00000572811 2597 ntBASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPGRIP1Q96KN7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 KRT8P17-201ENST00000453110 1448 ntBASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 CRYGFP-201ENST00000418459 633 ntBASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRIP1Q96KN7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
RPGRIP1Q96KN7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.7■□□□□ 0.91
RPGRIP1Q96KN7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPGRIP1Q96KN7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RPGRIP1Q96KN7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPGRIP1Q96KN7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RPGRIP1Q96KN7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPGRIP1Q96KN7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RPGRIP1Q96KN7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPGRIP1Q96KN7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPGRIP1Q96KN7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RPGRIP1Q96KN7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPGRIP1Q96KN7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPGRIP1Q96KN7 MESTP1-201ENST00000404287 994 ntBASIC20.7■□□□□ 0.9
RPGRIP1Q96KN7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.7■□□□□ 0.9
RPGRIP1Q96KN7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPGRIP1Q96KN7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.7■□□□□ 0.9
RPGRIP1Q96KN7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPGRIP1Q96KN7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms