Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFT1Q96AA3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RFT1Q96AA3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFT1Q96AA3 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.66■□□□□ 0.26
RFT1Q96AA3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RFT1Q96AA3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RFT1Q96AA3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFT1Q96AA3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.66■□□□□ 0.26
RFT1Q96AA3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.66■□□□□ 0.26
RFT1Q96AA3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RFT1Q96AA3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RFT1Q96AA3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFT1Q96AA3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RFT1Q96AA3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RFT1Q96AA3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RFT1Q96AA3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
RFT1Q96AA3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.66■□□□□ 0.26
RFT1Q96AA3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
RFT1Q96AA3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFT1Q96AA3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFT1Q96AA3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFT1Q96AA3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
RFT1Q96AA3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RFT1Q96AA3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFT1Q96AA3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFT1Q96AA3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.65■□□□□ 0.26
RFT1Q96AA3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFT1Q96AA3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.65■□□□□ 0.26
RFT1Q96AA3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFT1Q96AA3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
RFT1Q96AA3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RFT1Q96AA3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFT1Q96AA3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.65■□□□□ 0.26
RFT1Q96AA3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFT1Q96AA3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.65■□□□□ 0.26
RFT1Q96AA3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFT1Q96AA3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RFT1Q96AA3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RFT1Q96AA3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFT1Q96AA3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFT1Q96AA3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFT1Q96AA3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFT1Q96AA3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.65■□□□□ 0.26
RFT1Q96AA3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.65■□□□□ 0.26
RFT1Q96AA3 AC073210.2-201ENST00000430369 194 ntBASIC16.65■□□□□ 0.26
RFT1Q96AA3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.65■□□□□ 0.26
RFT1Q96AA3 AC092118.2-201ENST00000613495 667 ntBASIC16.65■□□□□ 0.26
RFT1Q96AA3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
RFT1Q96AA3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFT1Q96AA3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFT1Q96AA3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RFT1Q96AA3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RFT1Q96AA3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFT1Q96AA3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFT1Q96AA3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFT1Q96AA3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFT1Q96AA3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.65■□□□□ 0.26
RFT1Q96AA3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFT1Q96AA3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFT1Q96AA3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
RFT1Q96AA3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.26
RFT1Q96AA3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFT1Q96AA3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFT1Q96AA3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFT1Q96AA3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFT1Q96AA3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RFT1Q96AA3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RFT1Q96AA3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFT1Q96AA3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.64■□□□□ 0.25
RFT1Q96AA3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFT1Q96AA3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFT1Q96AA3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFT1Q96AA3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFT1Q96AA3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFT1Q96AA3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFT1Q96AA3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFT1Q96AA3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
RFT1Q96AA3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFT1Q96AA3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
RFT1Q96AA3 GUSBP6-202ENST00000438529 1198 ntBASIC16.64■□□□□ 0.25
RFT1Q96AA3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.64■□□□□ 0.25
RFT1Q96AA3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.64■□□□□ 0.25
RFT1Q96AA3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.64■□□□□ 0.25
RFT1Q96AA3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFT1Q96AA3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RFT1Q96AA3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFT1Q96AA3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFT1Q96AA3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RFT1Q96AA3 ZNF815P-204ENST00000434898 1737 ntBASIC16.64■□□□□ 0.25
RFT1Q96AA3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFT1Q96AA3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFT1Q96AA3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RFT1Q96AA3 AC092368.3-202ENST00000574180 1591 ntBASIC16.64■□□□□ 0.25
RFT1Q96AA3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RFT1Q96AA3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFT1Q96AA3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
RFT1Q96AA3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.63■□□□□ 0.25
RFT1Q96AA3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.63■□□□□ 0.25
RFT1Q96AA3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFT1Q96AA3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms