Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 MFAP1P1-201ENST00000442257 1255 ntBASIC18.11■□□□□ 0.49
UBE2E3Q969T4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2E3Q969T4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
UBE2E3Q969T4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
UBE2E3Q969T4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2E3Q969T4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
UBE2E3Q969T4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2E3Q969T4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2E3Q969T4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2E3Q969T4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.1■□□□□ 0.49
UBE2E3Q969T4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2E3Q969T4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2E3Q969T4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2E3Q969T4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2E3Q969T4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2E3Q969T4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2E3Q969T4 CA15P1-201ENST00000481698 905 ntBASIC18.1■□□□□ 0.49
UBE2E3Q969T4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.1■□□□□ 0.49
UBE2E3Q969T4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2E3Q969T4 AP003071.4-201ENST00000562276 1284 ntBASIC18.1■□□□□ 0.49
UBE2E3Q969T4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.1■□□□□ 0.49
UBE2E3Q969T4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.1■□□□□ 0.49
UBE2E3Q969T4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2E3Q969T4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
UBE2E3Q969T4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.1■□□□□ 0.49
UBE2E3Q969T4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2E3Q969T4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2E3Q969T4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2E3Q969T4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 KRT17P2-201ENST00000300992 1314 ntBASIC18.09■□□□□ 0.49
UBE2E3Q969T4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 AC068587.9-201ENST00000641814 219 ntBASIC18.09■□□□□ 0.49
UBE2E3Q969T4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2E3Q969T4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.08■□□□□ 0.49
UBE2E3Q969T4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
UBE2E3Q969T4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
UBE2E3Q969T4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.49
UBE2E3Q969T4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBE2E3Q969T4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBE2E3Q969T4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBE2E3Q969T4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBE2E3Q969T4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.08■□□□□ 0.49
UBE2E3Q969T4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBE2E3Q969T4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBE2E3Q969T4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBE2E3Q969T4 UNC93B2-201ENST00000285383 730 ntBASIC18.08■□□□□ 0.48
UBE2E3Q969T4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.08■□□□□ 0.48
UBE2E3Q969T4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
UBE2E3Q969T4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms