Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RTF1Q92541 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC24.55■■□□□ 1.52
RTF1Q92541 DBP-204ENST00000599385 709 ntTSL 3 BASIC24.55■■□□□ 1.52
RTF1Q92541 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTF1Q92541 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
RTF1Q92541 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTF1Q92541 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC24.55■■□□□ 1.52
RTF1Q92541 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC24.55■■□□□ 1.52
RTF1Q92541 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTF1Q92541 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTF1Q92541 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTF1Q92541 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTF1Q92541 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC24.55■■□□□ 1.52
RTF1Q92541 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
RTF1Q92541 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
RTF1Q92541 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
RTF1Q92541 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTF1Q92541 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RTF1Q92541 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RTF1Q92541 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC24.54■■□□□ 1.52
RTF1Q92541 FAM86EP-206ENST00000510506 987 ntBASIC24.54■■□□□ 1.52
RTF1Q92541 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTF1Q92541 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC24.54■■□□□ 1.52
RTF1Q92541 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC24.54■■□□□ 1.52
RTF1Q92541 AC112497.1-201ENST00000624824 639 ntBASIC24.54■■□□□ 1.52
RTF1Q92541 DFFB-212ENST00000625756 649 ntTSL 5 BASIC24.54■■□□□ 1.52
RTF1Q92541 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
RTF1Q92541 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTF1Q92541 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTF1Q92541 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC24.54■■□□□ 1.52
RTF1Q92541 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTF1Q92541 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTF1Q92541 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTF1Q92541 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTF1Q92541 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC24.54■■□□□ 1.52
RTF1Q92541 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
RTF1Q92541 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTF1Q92541 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RTF1Q92541 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTF1Q92541 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RTF1Q92541 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTF1Q92541 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTF1Q92541 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTF1Q92541 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
RTF1Q92541 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTF1Q92541 DAP-202ENST00000432074 1048 ntTSL 2 BASIC24.53■■□□□ 1.52
RTF1Q92541 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC24.53■■□□□ 1.52
RTF1Q92541 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTF1Q92541 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTF1Q92541 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTF1Q92541 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTF1Q92541 RASA4DP-201ENST00000460726 1199 ntBASIC24.53■■□□□ 1.52
RTF1Q92541 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC24.53■■□□□ 1.52
RTF1Q92541 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC24.53■■□□□ 1.52
RTF1Q92541 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC24.53■■□□□ 1.52
RTF1Q92541 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC24.53■■□□□ 1.52
RTF1Q92541 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTF1Q92541 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC24.53■■□□□ 1.52
RTF1Q92541 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC24.53■■□□□ 1.52
RTF1Q92541 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RTF1Q92541 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTF1Q92541 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC24.53■■□□□ 1.52
RTF1Q92541 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RTF1Q92541 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RTF1Q92541 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RTF1Q92541 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RTF1Q92541 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RTF1Q92541 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC24.52■■□□□ 1.52
RTF1Q92541 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RTF1Q92541 PCED1CP-201ENST00000419887 785 ntBASIC24.52■■□□□ 1.52
RTF1Q92541 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
RTF1Q92541 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC24.52■■□□□ 1.52
RTF1Q92541 AP000550.4-202ENST00000639755 178 ntBASIC24.52■■□□□ 1.52
RTF1Q92541 LINC01311-201ENST00000565162 1445 ntBASIC24.52■■□□□ 1.52
RTF1Q92541 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RTF1Q92541 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.51
RTF1Q92541 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC24.51■■□□□ 1.51
RTF1Q92541 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RTF1Q92541 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RTF1Q92541 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
RTF1Q92541 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC24.51■■□□□ 1.51
RTF1Q92541 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC24.51■■□□□ 1.51
RTF1Q92541 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC24.51■■□□□ 1.51
RTF1Q92541 LY6E-213ENST00000522528 606 ntTSL 3 BASIC24.51■■□□□ 1.51
RTF1Q92541 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RTF1Q92541 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC24.51■■□□□ 1.51
RTF1Q92541 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
RTF1Q92541 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC24.51■■□□□ 1.51
RTF1Q92541 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC24.51■■□□□ 1.51
RTF1Q92541 FGF14-AS2-201ENST00000606448 1074 ntBASIC24.51■■□□□ 1.51
RTF1Q92541 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC24.51■■□□□ 1.51
RTF1Q92541 HYMAI.1-201ENST00000620949 238 ntBASIC24.51■■□□□ 1.51
RTF1Q92541 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC24.51■■□□□ 1.51
RTF1Q92541 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RTF1Q92541 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC24.5■■□□□ 1.51
RTF1Q92541 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RTF1Q92541 MIR564-202ENST00000385049 94 ntBASIC24.5■■□□□ 1.51
RTF1Q92541 UPK3BP1-201ENST00000428678 509 ntBASIC24.5■■□□□ 1.51
RTF1Q92541 SEC1P-202ENST00000473944 940 ntBASIC24.5■■□□□ 1.51
RTF1Q92541 ZNF444P1-201ENST00000559497 298 ntBASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms