Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CKAP2Q8WWK9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CKAP2Q8WWK9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CKAP2Q8WWK9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.7■□□□□ 0.58
CKAP2Q8WWK9 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CKAP2Q8WWK9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.7■□□□□ 0.58
CKAP2Q8WWK9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.7■□□□□ 0.58
CKAP2Q8WWK9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 AC005829.2-201ENST00000571422 1056 ntBASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 MTMR9LP-203ENST00000426597 1545 ntBASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CKAP2Q8WWK9 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2Q8WWK9 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.68■□□□□ 0.58
CKAP2Q8WWK9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2Q8WWK9 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2Q8WWK9 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2Q8WWK9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2Q8WWK9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2Q8WWK9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2Q8WWK9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2Q8WWK9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CKAP2Q8WWK9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2Q8WWK9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2Q8WWK9 KRT18P16-201ENST00000510337 1294 ntBASIC18.68■□□□□ 0.58
CKAP2Q8WWK9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.68■□□□□ 0.58
CKAP2Q8WWK9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2Q8WWK9 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.68■□□□□ 0.58
CKAP2Q8WWK9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CKAP2Q8WWK9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2Q8WWK9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2Q8WWK9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.68■□□□□ 0.58
CKAP2Q8WWK9 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2Q8WWK9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CKAP2Q8WWK9 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.68■□□□□ 0.58
CKAP2Q8WWK9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CKAP2Q8WWK9 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CKAP2Q8WWK9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms