Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 TREX1-205ENST00000625293 1783 ntBASIC14.63□□□□□ -0.07
LINC01006Q8NI28 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 MIR564-202ENST00000385049 94 ntBASIC14.63□□□□□ -0.07
LINC01006Q8NI28 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 LINC00265-3P-201ENST00000447588 903 ntBASIC14.63□□□□□ -0.07
LINC01006Q8NI28 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 KRT17P6-201ENST00000453795 1220 ntBASIC14.63□□□□□ -0.07
LINC01006Q8NI28 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 AP000867.3-201ENST00000524675 377 ntBASIC14.63□□□□□ -0.07
LINC01006Q8NI28 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 TPSP2-201ENST00000561760 610 ntBASIC14.63□□□□□ -0.07
LINC01006Q8NI28 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LINC01006Q8NI28 Z83836.1-201ENST00000624605 1642 ntBASIC14.63□□□□□ -0.07
LINC01006Q8NI28 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01006Q8NI28 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01006Q8NI28 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01006Q8NI28 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01006Q8NI28 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC01006Q8NI28 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01006Q8NI28 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LINC01006Q8NI28 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01006Q8NI28 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01006Q8NI28 FEM1AP3-201ENST00000403722 1741 ntBASIC14.62□□□□□ -0.07
LINC01006Q8NI28 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC01006Q8NI28 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01006Q8NI28 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01006Q8NI28 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.62□□□□□ -0.07
LINC01006Q8NI28 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.62□□□□□ -0.07
LINC01006Q8NI28 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.62□□□□□ -0.07
LINC01006Q8NI28 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC01006Q8NI28 IFNL4P1-201ENST00000607083 540 ntBASIC14.62□□□□□ -0.07
LINC01006Q8NI28 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
LINC01006Q8NI28 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01006Q8NI28 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC01006Q8NI28 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01006Q8NI28 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01006Q8NI28 EFS-203ENST00000429593 2610 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC01006Q8NI28 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 TSPY19P-201ENST00000418461 509 ntBASIC14.61□□□□□ -0.07
LINC01006Q8NI28 TSPY18P-201ENST00000441642 509 ntBASIC14.61□□□□□ -0.07
LINC01006Q8NI28 TOB2P1-201ENST00000469761 992 ntBASIC14.61□□□□□ -0.07
LINC01006Q8NI28 AP003733.1-201ENST00000491725 852 ntBASIC14.61□□□□□ -0.07
LINC01006Q8NI28 AC005332.3-201ENST00000589904 676 ntBASIC14.61□□□□□ -0.07
LINC01006Q8NI28 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 AL121772.3-201ENST00000610840 674 ntBASIC14.61□□□□□ -0.07
LINC01006Q8NI28 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 KRT8P32-201ENST00000512863 1461 ntBASIC14.61□□□□□ -0.07
LINC01006Q8NI28 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01006Q8NI28 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms