Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LINC00116Q8NCU8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LINC00116Q8NCU8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC23.82■■□□□ 1.4
LINC00116Q8NCU8 PMS2P1-201ENST00000431037 1228 ntBASIC23.82■■□□□ 1.4
LINC00116Q8NCU8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC23.82■■□□□ 1.4
LINC00116Q8NCU8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
LINC00116Q8NCU8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.82■■□□□ 1.4
LINC00116Q8NCU8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
LINC00116Q8NCU8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LINC00116Q8NCU8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LINC00116Q8NCU8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC23.81■■□□□ 1.4
LINC00116Q8NCU8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LINC00116Q8NCU8 Z82202.1-201ENST00000623446 1880 ntBASIC23.81■■□□□ 1.4
LINC00116Q8NCU8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
LINC00116Q8NCU8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23.81■■□□□ 1.4
LINC00116Q8NCU8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC23.81■■□□□ 1.4
LINC00116Q8NCU8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
LINC00116Q8NCU8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LINC00116Q8NCU8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LINC00116Q8NCU8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC23.81■■□□□ 1.4
LINC00116Q8NCU8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC23.81■■□□□ 1.4
LINC00116Q8NCU8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LINC00116Q8NCU8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.81■■□□□ 1.4
LINC00116Q8NCU8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LINC00116Q8NCU8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LINC00116Q8NCU8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LINC00116Q8NCU8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
LINC00116Q8NCU8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LINC00116Q8NCU8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.81■■□□□ 1.4
LINC00116Q8NCU8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LINC00116Q8NCU8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC23.8■■□□□ 1.4
LINC00116Q8NCU8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC23.8■■□□□ 1.4
LINC00116Q8NCU8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
LINC00116Q8NCU8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LINC00116Q8NCU8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LINC00116Q8NCU8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.8■■□□□ 1.4
LINC00116Q8NCU8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
LINC00116Q8NCU8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LINC00116Q8NCU8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LINC00116Q8NCU8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
LINC00116Q8NCU8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LINC00116Q8NCU8 RPP21-221ENST00000428040 594 ntTSL 2 BASIC23.8■■□□□ 1.4
LINC00116Q8NCU8 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LINC00116Q8NCU8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LINC00116Q8NCU8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC23.8■■□□□ 1.4
LINC00116Q8NCU8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC23.8■■□□□ 1.4
LINC00116Q8NCU8 AP001005.1-201ENST00000571755 1248 ntBASIC23.8■■□□□ 1.4
LINC00116Q8NCU8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC23.8■■□□□ 1.4
LINC00116Q8NCU8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LINC00116Q8NCU8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LINC00116Q8NCU8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
LINC00116Q8NCU8 AC006333.2-201ENST00000607957 2099 ntBASIC23.8■■□□□ 1.4
LINC00116Q8NCU8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC23.8■■□□□ 1.4
LINC00116Q8NCU8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.8■■□□□ 1.4
LINC00116Q8NCU8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.79■■□□□ 1.4
LINC00116Q8NCU8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LINC00116Q8NCU8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LINC00116Q8NCU8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LINC00116Q8NCU8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
LINC00116Q8NCU8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
LINC00116Q8NCU8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
LINC00116Q8NCU8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
LINC00116Q8NCU8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LINC00116Q8NCU8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC23.79■■□□□ 1.4
LINC00116Q8NCU8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LINC00116Q8NCU8 GUSBP12-201ENST00000513727 720 ntBASIC23.79■■□□□ 1.4
LINC00116Q8NCU8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC23.79■■□□□ 1.4
LINC00116Q8NCU8 AC117500.6-201ENST00000624871 588 ntBASIC23.79■■□□□ 1.4
LINC00116Q8NCU8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC23.79■■□□□ 1.4
LINC00116Q8NCU8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LINC00116Q8NCU8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.79■■□□□ 1.4
LINC00116Q8NCU8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
LINC00116Q8NCU8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
LINC00116Q8NCU8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LINC00116Q8NCU8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LINC00116Q8NCU8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LINC00116Q8NCU8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
LINC00116Q8NCU8 AC112907.3-201ENST00000577781 2400 ntBASIC23.78■■□□□ 1.4
LINC00116Q8NCU8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LINC00116Q8NCU8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC23.78■■□□□ 1.4
LINC00116Q8NCU8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC23.78■■□□□ 1.4
LINC00116Q8NCU8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
LINC00116Q8NCU8 AC024563.2-201ENST00000603282 481 ntBASIC23.78■■□□□ 1.4
LINC00116Q8NCU8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC23.78■■□□□ 1.4
LINC00116Q8NCU8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LINC00116Q8NCU8 AC148477.8-201ENST00000624298 468 ntBASIC23.78■■□□□ 1.4
LINC00116Q8NCU8 KRT8P32-201ENST00000512863 1461 ntBASIC23.78■■□□□ 1.4
LINC00116Q8NCU8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LINC00116Q8NCU8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC23.78■■□□□ 1.4
LINC00116Q8NCU8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LINC00116Q8NCU8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC23.78■■□□□ 1.4
LINC00116Q8NCU8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LINC00116Q8NCU8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
LINC00116Q8NCU8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LINC00116Q8NCU8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LINC00116Q8NCU8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC23.77■■□□□ 1.4
LINC00116Q8NCU8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LINC00116Q8NCU8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC23.77■■□□□ 1.4
LINC00116Q8NCU8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LINC00116Q8NCU8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms