Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf42Q8N5U0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf42Q8N5U0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.67■□□□□ 0.1
C11orf42Q8N5U0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf42Q8N5U0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
C11orf42Q8N5U0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
C11orf42Q8N5U0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf42Q8N5U0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.67■□□□□ 0.1
C11orf42Q8N5U0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C11orf42Q8N5U0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.67■□□□□ 0.1
C11orf42Q8N5U0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 PRSS44-201ENST00000515154 1146 ntBASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 BX088651.1-201ENST00000540551 451 ntBASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 AP005242.2-201ENST00000580065 1175 ntBASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C11orf42Q8N5U0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 AL390955.1-201ENST00000428694 934 ntBASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 SLC25A1P4-201ENST00000567977 778 ntBASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 IRX1P1-201ENST00000438849 1838 ntBASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 FEM1AP3-201ENST00000403722 1741 ntBASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C11orf42Q8N5U0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
C11orf42Q8N5U0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C11orf42Q8N5U0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C11orf42Q8N5U0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C11orf42Q8N5U0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C11orf42Q8N5U0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C11orf42Q8N5U0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C11orf42Q8N5U0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
C11orf42Q8N5U0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C11orf42Q8N5U0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms