Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 SAPCD2P3-201ENST00000455031 850 ntBASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
COL27A1Q8IZC6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL27A1Q8IZC6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL27A1Q8IZC6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL27A1Q8IZC6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.72■□□□□ 0.43
COL27A1Q8IZC6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL27A1Q8IZC6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL27A1Q8IZC6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL27A1Q8IZC6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.72■□□□□ 0.43
COL27A1Q8IZC6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.72■□□□□ 0.43
COL27A1Q8IZC6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.72■□□□□ 0.43
COL27A1Q8IZC6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
COL27A1Q8IZC6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
COL27A1Q8IZC6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL27A1Q8IZC6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL27A1Q8IZC6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL27A1Q8IZC6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL27A1Q8IZC6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL27A1Q8IZC6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL27A1Q8IZC6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 AF238378.1-201ENST00000526806 358 ntBASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 AC090616.6-201ENST00000582640 721 ntBASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 BNIP3P18-201ENST00000593976 575 ntBASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 Z69720.1-201ENST00000601483 472 ntBASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 AL121772.3-201ENST00000610840 674 ntBASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 MIR7706-201ENST00000613747 67 ntBASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 AC068587.9-201ENST00000641814 219 ntBASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.71■□□□□ 0.43
COL27A1Q8IZC6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
COL27A1Q8IZC6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.7■□□□□ 0.42
COL27A1Q8IZC6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.7■□□□□ 0.42
COL27A1Q8IZC6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL27A1Q8IZC6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL27A1Q8IZC6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.7■□□□□ 0.42
COL27A1Q8IZC6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.7■□□□□ 0.42
COL27A1Q8IZC6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.7■□□□□ 0.42
COL27A1Q8IZC6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL27A1Q8IZC6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.7■□□□□ 0.42
COL27A1Q8IZC6 AL353801.3-201ENST00000609898 542 ntBASIC17.7■□□□□ 0.42
COL27A1Q8IZC6 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.7■□□□□ 0.42
COL27A1Q8IZC6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.7■□□□□ 0.42
COL27A1Q8IZC6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.7■□□□□ 0.42
COL27A1Q8IZC6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL27A1Q8IZC6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL27A1Q8IZC6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.7■□□□□ 0.42
COL27A1Q8IZC6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL27A1Q8IZC6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.7■□□□□ 0.42
COL27A1Q8IZC6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
COL27A1Q8IZC6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL27A1Q8IZC6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL27A1Q8IZC6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 KRT18P41-201ENST00000518924 1277 ntBASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 AC024563.2-201ENST00000603282 481 ntBASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 KRT8P50-201ENST00000562022 1438 ntBASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.69■□□□□ 0.42
COL27A1Q8IZC6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms