Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEFF1Q8IYR6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEFF1Q8IYR6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEFF1Q8IYR6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEFF1Q8IYR6 LINC00265-3P-201ENST00000447588 903 ntBASIC18.7■□□□□ 0.58
TMEFF1Q8IYR6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TMEFF1Q8IYR6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEFF1Q8IYR6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
TMEFF1Q8IYR6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TMEFF1Q8IYR6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEFF1Q8IYR6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEFF1Q8IYR6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEFF1Q8IYR6 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEFF1Q8IYR6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEFF1Q8IYR6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEFF1Q8IYR6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 MIR662-201ENST00000384847 95 ntBASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 AC009078.2-202ENST00000463353 338 ntBASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 RNF126P1-202ENST00000569893 925 ntBASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 MIR3917-201ENST00000580971 93 ntBASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TMEFF1Q8IYR6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 AFG3L1P-217ENST00000557444 2447 ntBASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 TSPY19P-201ENST00000418461 509 ntBASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 TSPY18P-201ENST00000441642 509 ntBASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 TPSP2-201ENST00000561760 610 ntBASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEFF1Q8IYR6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 AC091304.2-201ENST00000564639 760 ntBASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 AL031008.1-201ENST00000619963 541 ntBASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEFF1Q8IYR6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEFF1Q8IYR6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms