Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.93■□□□□ 0.94
DHX40Q8IX18 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.93■□□□□ 0.94
DHX40Q8IX18 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.93■□□□□ 0.94
DHX40Q8IX18 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.93■□□□□ 0.94
DHX40Q8IX18 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.93■□□□□ 0.94
DHX40Q8IX18 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
DHX40Q8IX18 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DHX40Q8IX18 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.93■□□□□ 0.94
DHX40Q8IX18 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DHX40Q8IX18 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.93■□□□□ 0.94
DHX40Q8IX18 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
DHX40Q8IX18 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
DHX40Q8IX18 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
DHX40Q8IX18 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.93■□□□□ 0.94
DHX40Q8IX18 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DHX40Q8IX18 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
DHX40Q8IX18 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.93■□□□□ 0.94
DHX40Q8IX18 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DHX40Q8IX18 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DHX40Q8IX18 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
DHX40Q8IX18 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
DHX40Q8IX18 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
DHX40Q8IX18 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DHX40Q8IX18 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.92■□□□□ 0.94
DHX40Q8IX18 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DHX40Q8IX18 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.92■□□□□ 0.94
DHX40Q8IX18 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
DHX40Q8IX18 FAM201B-201ENST00000458407 597 ntBASIC20.92■□□□□ 0.94
DHX40Q8IX18 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DHX40Q8IX18 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
DHX40Q8IX18 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DHX40Q8IX18 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DHX40Q8IX18 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
DHX40Q8IX18 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DHX40Q8IX18 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
DHX40Q8IX18 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.92■□□□□ 0.94
DHX40Q8IX18 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DHX40Q8IX18 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.92■□□□□ 0.94
DHX40Q8IX18 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.92■□□□□ 0.94
DHX40Q8IX18 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DHX40Q8IX18 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DHX40Q8IX18 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DHX40Q8IX18 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DHX40Q8IX18 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
DHX40Q8IX18 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DHX40Q8IX18 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DHX40Q8IX18 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
DHX40Q8IX18 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
DHX40Q8IX18 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DHX40Q8IX18 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.91■□□□□ 0.94
DHX40Q8IX18 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.91■□□□□ 0.94
DHX40Q8IX18 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DHX40Q8IX18 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.91■□□□□ 0.94
DHX40Q8IX18 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.91■□□□□ 0.94
DHX40Q8IX18 C1QL1P1-201ENST00000568105 661 ntBASIC20.91■□□□□ 0.94
DHX40Q8IX18 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
DHX40Q8IX18 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DHX40Q8IX18 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.91■□□□□ 0.94
DHX40Q8IX18 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
DHX40Q8IX18 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DHX40Q8IX18 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.9■□□□□ 0.94
DHX40Q8IX18 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DHX40Q8IX18 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DHX40Q8IX18 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
DHX40Q8IX18 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
DHX40Q8IX18 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
DHX40Q8IX18 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.9■□□□□ 0.94
DHX40Q8IX18 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
DHX40Q8IX18 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.9■□□□□ 0.94
DHX40Q8IX18 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DHX40Q8IX18 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DHX40Q8IX18 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.9■□□□□ 0.94
DHX40Q8IX18 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.9■□□□□ 0.94
DHX40Q8IX18 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.9■□□□□ 0.94
DHX40Q8IX18 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DHX40Q8IX18 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
DHX40Q8IX18 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
DHX40Q8IX18 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DHX40Q8IX18 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
DHX40Q8IX18 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
DHX40Q8IX18 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.9■□□□□ 0.94
DHX40Q8IX18 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DHX40Q8IX18 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DHX40Q8IX18 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
DHX40Q8IX18 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
DHX40Q8IX18 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.89■□□□□ 0.94
DHX40Q8IX18 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
DHX40Q8IX18 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.89■□□□□ 0.94
DHX40Q8IX18 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DHX40Q8IX18 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DHX40Q8IX18 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DHX40Q8IX18 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DHX40Q8IX18 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
DHX40Q8IX18 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DHX40Q8IX18 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DHX40Q8IX18 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DHX40Q8IX18 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DHX40Q8IX18 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.89■□□□□ 0.93
DHX40Q8IX18 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.89■□□□□ 0.93
DHX40Q8IX18 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms